RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SPAG11BQ08648 103 aa3.13□□□□□ -1.91
PRKD3-210ENST00000494667 C9orf116Q5BN46 136 aaPredicted RBP3.13□□□□□ -1.91
PRKD3-210ENST00000494667 PLA2G2DQ9UNK4 145 aa3.13□□□□□ -1.91
PRKD3-210ENST00000494667 AKAP13Q12802 2813 aa3.13□□□□□ -1.91
PRKD3-210ENST00000494667 IGLV7-46A0A075B6I9 117 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 C3orf84H3BNL1 204 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 HRNRQ86YZ3 2850 aaPredicted RBP3.12□□□□□ -1.91
PRKD3-210ENST00000494667 MP68P56378 58 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 MOBPQ13875 183 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 CYSRT1A8MQ03 144 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 Q6YL49 198 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 C19orf73Q9NVV2 129 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 C6orf48Q9UBA6 75 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 DCHS2Q6V1P9 2916 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 REG3AQ06141 175 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 C11orf45Q8TAV5 145 aa3.12□□□□□ -1.91
PRKD3-210ENST00000494667 IGLV8-61A0A075B6I0 122 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
PRKD3-210ENST00000494667 SPRR1AP35321 89 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 IGLV5-37A0A075B6J1 123 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 LRCOL1A6NCL2 159 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 MGAQ8IWI9 3026 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 B4DSR2 109 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 K7EQZ3 153 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 CSMD1Q96PZ7 3565 aa3.11□□□□□ -1.91
PRKD3-210ENST00000494667 PLA2G1BP04054 148 aaKnown RBP3.1□□□□□ -1.91
PRKD3-210ENST00000494667 PRO0255Q9UI72 69 aa3.1□□□□□ -1.91
PRKD3-210ENST00000494667 EYSQ5T1H1 3165 aa3.1□□□□□ -1.91
PRKD3-210ENST00000494667 ZFHX4Q86UP3 3567 aa3.1□□□□□ -1.91
PRKD3-210ENST00000494667 TACC2O95359 2948 aa3.1□□□□□ -1.91
PRKD3-210ENST00000494667 SPTBN1Q01082 2364 aaKnown RBP3.1□□□□□ -1.91
PRKD3-210ENST00000494667 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
PRKD3-210ENST00000494667 EP300Q09472 2414 aaPredicted RBP3.1□□□□□ -1.91
PRKD3-210ENST00000494667 GYPEP15421 78 aa3.09□□□□□ -1.91
PRKD3-210ENST00000494667 C1orf137Q5JT78 98 aa3.09□□□□□ -1.92
PRKD3-210ENST00000494667 COA5Q86WW8 74 aa3.09□□□□□ -1.92
PRKD3-210ENST00000494667 WFDC10AQ9H1F0 79 aa3.09□□□□□ -1.92
PRKD3-210ENST00000494667 A6NED7 52 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 C18orf65Q6ZTR6 163 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 ANKHD1Q8IWZ3 2542 aaKnown RBP3.08□□□□□ -1.92
PRKD3-210ENST00000494667 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 Q6ZRX8 168 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 ROS1P08922 2347 aa3.08□□□□□ -1.92
PRKD3-210ENST00000494667 LELP1Q5T871 98 aa3.07□□□□□ -1.92
PRKD3-210ENST00000494667 APC2O95996 2303 aa3.07□□□□□ -1.92
PRKD3-210ENST00000494667 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
PRKD3-210ENST00000494667 H0Y9P7 68 aa3.07□□□□□ -1.92
PRKD3-210ENST00000494667 IGLV1-51P01701 117 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 DEFB136Q30KP8 78 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 Q8NAQ8 132 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 CEP250Q9BV73 2442 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 ANGP03950 147 aaKnown RBP3.06□□□□□ -1.92
PRKD3-210ENST00000494667 SPTSSBQ8NFR3 76 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 LOC400499M0QZD8 3231 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 CASC2Q6XLA1 102 aa3.06□□□□□ -1.92
PRKD3-210ENST00000494667 CNOT1A5YKK6 2376 aaKnown RBP3.06□□□□□ -1.92
PRKD3-210ENST00000494667 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 Q6ZR54 194 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 PRRC2CQ9Y520 2896 aaKnown RBP3.05□□□□□ -1.92
PRKD3-210ENST00000494667 CLPSL2Q6UWE3 100 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 X6R8D5 127 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 DEFB131BA0A096LNP1 70 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 RTL8CO15255 209 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 C7orf33Q8WU49 177 aa3.05□□□□□ -1.92
PRKD3-210ENST00000494667 MAP1BP46821 2468 aaKnown RBP3.04□□□□□ -1.92
PRKD3-210ENST00000494667 LINC00313P59037 77 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 ALMS1Q8TCU4 4167 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 XAGE1AQ9HD64 81 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 ADGRG4Q8IZF6 3080 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 IGLV1-50A0A075B6I6 118 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 J3QL48 77 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 CCL19Q99731 98 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 TP53AIP1Q9HCN2 124 aa3.04□□□□□ -1.92
PRKD3-210ENST00000494667 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 CELSR1Q9NYQ6 3014 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 A8MWP4 228 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 PRR4Q16378 134 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 PCNX1Q96RV3 2341 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 H3BS24 57 aa3.03□□□□□ -1.92
PRKD3-210ENST00000494667 H3BNG1 76 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 SPINK7P58062 85 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 AKAP9Q99996 3911 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 ASPMQ8IZT6 3477 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 LINC00476Q8WZB0 136 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 LINC00472Q9H8W2 130 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 LRBAP50851 2863 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 SPRR1BP22528 89 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
PRKD3-210ENST00000494667 BOD1L1Q8NFC6 3051 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 TRIOBPQ9H2D6 2365 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms