RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 Q6ZRU5 148 aa8.82□□□□□ -1
NUP188-208ENST00000491502 ARL17AQ8IVW1 177 aa8.82□□□□□ -1
NUP188-208ENST00000491502 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
NUP188-208ENST00000491502 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
NUP188-208ENST00000491502 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
NUP188-208ENST00000491502 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
NUP188-208ENST00000491502 TRAV13-2A0A0B4J235 113 aa8.8□□□□□ -1
NUP188-208ENST00000491502 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
NUP188-208ENST00000491502 C9orf116Q5BN46 136 aaPredicted RBP8.8□□□□□ -1
NUP188-208ENST00000491502 HERC2O95714 4834 aa8.79□□□□□ -1
NUP188-208ENST00000491502 LECT2O14960 151 aa8.79□□□□□ -1
NUP188-208ENST00000491502 NDUFC2O95298 119 aa8.79□□□□□ -1
NUP188-208ENST00000491502 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
NUP188-208ENST00000491502 CFC1BP0CG36 223 aa8.79□□□□□ -1
NUP188-208ENST00000491502 CFC1P0CG37 223 aa8.79□□□□□ -1
NUP188-208ENST00000491502 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
NUP188-208ENST00000491502 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
NUP188-208ENST00000491502 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
NUP188-208ENST00000491502 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
NUP188-208ENST00000491502 TAX1BP3O14907 124 aa8.77□□□□□ -1.01
NUP188-208ENST00000491502 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
NUP188-208ENST00000491502 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
NUP188-208ENST00000491502 K7ERJ3 54 aa8.76□□□□□ -1.01
NUP188-208ENST00000491502 Q1RN00 199 aa8.76□□□□□ -1.01
NUP188-208ENST00000491502 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
NUP188-208ENST00000491502 CBY1Q9Y3M2 126 aa8.75□□□□□ -1.01
NUP188-208ENST00000491502 Q8N814 137 aa8.74□□□□□ -1.01
NUP188-208ENST00000491502 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 H3BUT2 72 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 SLPIP03973 132 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 COX6CP09669 75 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 FABP2P12104 132 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 GAGE2EQ4V326 116 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 GAGE2DQ9UEU5 116 aa8.73□□□□□ -1.01
NUP188-208ENST00000491502 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
NUP188-208ENST00000491502 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP188-208ENST00000491502 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
NUP188-208ENST00000491502 PSMB2P49721 201 aa8.72□□□□□ -1.01
NUP188-208ENST00000491502 WFDC2Q14508 124 aa8.72□□□□□ -1.01
NUP188-208ENST00000491502 LRP1BQ9NZR2 4599 aa8.72□□□□□ -1.01
NUP188-208ENST00000491502 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.71□□□□□ -1.02
NUP188-208ENST00000491502 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 Q6ZRP5 223 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
NUP188-208ENST00000491502 A0A1W2PPM0 123 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 H7C2G1 150 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 TSPAN13O95857 204 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 VAMP3Q15836 100 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 C9orf163Q8N9P6 203 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
NUP188-208ENST00000491502 RYR1P21817 5038 aa8.69□□□□□ -1.02
NUP188-208ENST00000491502 GTF2H5Q6ZYL4 71 aa8.69□□□□□ -1.02
NUP188-208ENST00000491502 Q8N1X5 172 aa8.69□□□□□ -1.02
NUP188-208ENST00000491502 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
NUP188-208ENST00000491502 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
NUP188-208ENST00000491502 A0A1B0GV90 55 aa8.68□□□□□ -1.02
NUP188-208ENST00000491502 M0R378 163 aa8.68□□□□□ -1.02
NUP188-208ENST00000491502 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
NUP188-208ENST00000491502 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
NUP188-208ENST00000491502 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
NUP188-208ENST00000491502 TRBV20-1A0A075B6N2 111 aa8.66□□□□□ -1.02
NUP188-208ENST00000491502 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
NUP188-208ENST00000491502 NCR3O14931 201 aa8.66□□□□□ -1.02
NUP188-208ENST00000491502 VPREB1P12018 145 aa8.65□□□□□ -1.02
NUP188-208ENST00000491502 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
NUP188-208ENST00000491502 XGP55808 180 aa8.65□□□□□ -1.02
NUP188-208ENST00000491502 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
NUP188-208ENST00000491502 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
NUP188-208ENST00000491502 HSPG2P98160 4391 aa8.64□□□□□ -1.03
NUP188-208ENST00000491502 IGLV5-37A0A075B6J1 123 aa8.64□□□□□ -1.03
NUP188-208ENST00000491502 SNCGO76070 127 aa8.64□□□□□ -1.03
NUP188-208ENST00000491502 NAA38Q9BRA0 125 aaKnown RBP8.64□□□□□ -1.03
NUP188-208ENST00000491502 H0YGX0 51 aa8.63□□□□□ -1.03
NUP188-208ENST00000491502 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
NUP188-208ENST00000491502 K7EP34 96 aa8.62□□□□□ -1.03
NUP188-208ENST00000491502 TRIAP1O43715 76 aa8.62□□□□□ -1.03
NUP188-208ENST00000491502 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
NUP188-208ENST00000491502 PRR3P79522 188 aaKnown RBP8.62□□□□□ -1.03
NUP188-208ENST00000491502 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
NUP188-208ENST00000491502 A0A096LNI7 61 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 SMIM11BQ8TCY0 68 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 DPH3Q96FX2 82 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
NUP188-208ENST00000491502 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
NUP188-208ENST00000491502 UBE2V1Q13404 147 aa8.6□□□□□ -1.03
NUP188-208ENST00000491502 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
NUP188-208ENST00000491502 FAM30AQ9NZY2 134 aa8.59□□□□□ -1.03
NUP188-208ENST00000491502 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
NUP188-208ENST00000491502 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
NUP188-208ENST00000491502 Q6ZSA8 131 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms