RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 HMGXB3Q12766 1538 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 ZFYVE16Q7Z3T8 1539 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 SPTBN2O15020 2390 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 PARP14Q460N5 1801 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 SBF2Q86WG5 1849 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 TANC2Q9HCD6 1990 aa0.09□□□□□ -2.39
PRPF4B-207ENST00000490399 A0A087WVE0 104 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 LOC100130705A0A1B0GUX0 176 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 PVALEFA0A1B0GWK0 134 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 hADV29S1A0JD25 119 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 CPSF4LA6NMK7 179 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 I3L2K1 104 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 M0R143 59 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 M0R2T5 61 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 LEPROTL1O95214 131 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 HMGA1P17096 107 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 FAUP35544 74 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 RBP2P50120 134 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 DEFB135Q30KP9 77 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 COX6B2Q6YFQ2 88 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 SPRR4Q96PI1 79 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 CDKN2A-AS1Q9UH64 79 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 RABAC1Q9UI14 185 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 TROQ12816 1431 aaPredicted RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 THOC2Q8NI27 1593 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 MYCBP2O75592 4640 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 MAP1BP46821 2468 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 CC2D2AQ9P2K1 1620 aa0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 KIAA0100Q14667 2235 aaKnown RBP0.09□□□□□ -2.4
PRPF4B-207ENST00000490399 LRP1Q07954 4544 aaKnown RBP0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 CLTCQ00610 1675 aaKnown RBP0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 ABCC3O15438 1527 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 CEP350Q5VT06 3117 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 TRPM7Q96QT4 1865 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 PHLPP1O60346 1717 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 LRP1BQ9NZR2 4599 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 CEP162Q5TB80 1403 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 F5P12259 2224 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 CACNA1CQ13936 2221 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 A0A1B0GUT8 65 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 KANTRA0A1W2PQU2 76 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 LINC00587B1AMM8 73 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 HMGN2P05204 90 aaKnown RBP0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 ACYP1P07311 99 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 SPRR1BP22528 89 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 PKIAP61925 76 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 DEFB112Q30KQ8 113 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 ATP5EP2Q5VTU8 51 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 DEFB107AQ8IZN7 70 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 LCN9Q8WX39 176 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 LINC00472Q9H8W2 130 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 APLNQ9ULZ1 77 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 V9GYS6 101 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 MUC22E2RYF6 1773 aaPredicted RBP0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 TEX15Q9BXT5 2789 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 CCDC88BA6NC98 1476 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 NKTRP30414 1462 aaKnown RBP0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 TET3O43151 1660 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
PRPF4B-207ENST00000490399 PLXNA1Q9UIW2 1896 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 MED13LQ71F56 2210 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 PLIN4Q96Q06 1357 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 NBEAQ8NFP9 2946 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 NUP188Q5SRE5 1749 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 ARHGEF5Q12774 1597 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 SAMD9Q5K651 1589 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 AKAP11Q9UKA4 1901 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 UACAQ9BZF9 1416 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 IQCF6A8MYZ5 107 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 F8WEM9 126 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 H7BZZ5 65 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 MRPL33O75394 65 aaKnown RBP0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 SPRR2DP22532 72 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 SNRPFP62306 86 aaKnown RBP0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 C9orf62Q8N4C0 152 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 MRPL34Q9BQ48 92 aaKnown RBP0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 HIGD1BQ9P298 99 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 LINC00474Q9P2X8 69 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 C5P01031 1676 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 CDK5RAP2Q96SN8 1893 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 ABCA1O95477 2261 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 ABCA4P78363 2273 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 SLIT1O75093 1534 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 URB2Q14146 1524 aaKnown RBP0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 AKAP6Q13023 2319 aa0.07□□□□□ -2.4
PRPF4B-207ENST00000490399 CEP295Q9C0D2 2601 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 DOCK2Q92608 1830 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 WNK3Q9BYP7 1800 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 TARBP1Q13395 1621 aaKnown RBP0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 MYO3AQ8NEV4 1616 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 HFM1A2PYH4 1435 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 ANKRD50Q9ULJ7 1429 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 LAMA1P25391 3075 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 HSPG2P98160 4391 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 SCN7AQ01118 1682 aa0.06□□□□□ -2.4
PRPF4B-207ENST00000490399 TLN2Q9Y4G6 2542 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms