RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
BRD9-208ENST00000489816 LELP1Q5T871 98 aa10.62□□□□□ -0.71
BRD9-208ENST00000489816 LINC00846Q9NV44 126 aa10.62□□□□□ -0.71
BRD9-208ENST00000489816 CXCL5P42830 114 aa10.61□□□□□ -0.71
BRD9-208ENST00000489816 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
BRD9-208ENST00000489816 ORMDL1Q9P0S3 153 aa10.61□□□□□ -0.71
BRD9-208ENST00000489816 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
BRD9-208ENST00000489816 ACYP1P07311 99 aa10.6□□□□□ -0.71
BRD9-208ENST00000489816 KPRPQ5T749 579 aaPredicted RBP10.6□□□□□ -0.71
BRD9-208ENST00000489816 Q6Q795 121 aa10.59□□□□□ -0.71
BRD9-208ENST00000489816 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
BRD9-208ENST00000489816 Q8N814 137 aa10.59□□□□□ -0.71
BRD9-208ENST00000489816 A0A087WVE0 104 aa10.58□□□□□ -0.72
BRD9-208ENST00000489816 WFDC9Q8NEX5 89 aa10.57□□□□□ -0.72
BRD9-208ENST00000489816 PPDPFQ9H3Y8 114 aa10.57□□□□□ -0.72
BRD9-208ENST00000489816 TRBV7-7A0A0K0K1E9 115 aa10.57□□□□□ -0.72
BRD9-208ENST00000489816 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
BRD9-208ENST00000489816 C6orf48Q9UBA6 75 aa10.56□□□□□ -0.72
BRD9-208ENST00000489816 COX17Q14061 63 aa10.55□□□□□ -0.72
BRD9-208ENST00000489816 ZNF561-AS1K7EIQ3 104 aa10.54□□□□□ -0.72
BRD9-208ENST00000489816 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 ESRGQ1W209 222 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
BRD9-208ENST00000489816 HIST1H4AP62805 103 aaKnown RBP10.52□□□□□ -0.73
BRD9-208ENST00000489816 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
BRD9-208ENST00000489816 NDUFC2O95298 119 aa10.51□□□□□ -0.73
BRD9-208ENST00000489816 IGKV2D-24A0A075B6R9 120 aa10.51□□□□□ -0.73
BRD9-208ENST00000489816 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
BRD9-208ENST00000489816 Q6ZQY7 126 aa10.5□□□□□ -0.73
BRD9-208ENST00000489816 MRAPQ8TCY5 172 aa10.5□□□□□ -0.73
BRD9-208ENST00000489816 M0R2N4 97 aa10.49□□□□□ -0.73
BRD9-208ENST00000489816 Q6ZRU5 148 aa10.49□□□□□ -0.73
BRD9-208ENST00000489816 TENM2Q9NT68 2774 aa10.49□□□□□ -0.73
BRD9-208ENST00000489816 hADV29S1A0JD25 119 aa10.49□□□□□ -0.73
BRD9-208ENST00000489816 LINC00575Q6W349 94 aa10.49□□□□□ -0.73
BRD9-208ENST00000489816 OBSCN-AS1Q96MR7 158 aa10.48□□□□□ -0.73
BRD9-208ENST00000489816 TMEM256-PLSCR3K7ERE1 68 aa10.48□□□□□ -0.73
BRD9-208ENST00000489816 STAB2Q8WWQ8 2551 aa10.47□□□□□ -0.73
BRD9-208ENST00000489816 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
BRD9-208ENST00000489816 CCKP06307 115 aa10.45□□□□□ -0.74
BRD9-208ENST00000489816 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
BRD9-208ENST00000489816 IMUPQ9GZP8 106 aa10.45□□□□□ -0.74
BRD9-208ENST00000489816 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
BRD9-208ENST00000489816 TRAV23DV6A0A075B6W5 121 aa10.43□□□□□ -0.74
BRD9-208ENST00000489816 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
BRD9-208ENST00000489816 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
BRD9-208ENST00000489816 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
BRD9-208ENST00000489816 FAM19A1Q7Z5A9 133 aa10.43□□□□□ -0.74
BRD9-208ENST00000489816 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
BRD9-208ENST00000489816 A0A1B0GX51 115 aa10.42□□□□□ -0.74
BRD9-208ENST00000489816 JMJD7-PLA2G4BH0Y9G9 81 aa10.42□□□□□ -0.74
BRD9-208ENST00000489816 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
BRD9-208ENST00000489816 ZNF73O43830 326 aaPredicted RBP10.41□□□□□ -0.74
BRD9-208ENST00000489816 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
BRD9-208ENST00000489816 SMIM20Q8N5G0 67 aa10.4□□□□□ -0.74
BRD9-208ENST00000489816 DIRC1Q969H9 104 aa10.4□□□□□ -0.74
BRD9-208ENST00000489816 WIPF1O43516 503 aa10.4□□□□□ -0.74
BRD9-208ENST00000489816 Q6ZRP5 223 aa10.4□□□□□ -0.74
BRD9-208ENST00000489816 KRTAP26-1Q6PEX3 210 aa10.4□□□□□ -0.75
BRD9-208ENST00000489816 CASC10Q5T4H9 136 aa10.39□□□□□ -0.75
BRD9-208ENST00000489816 HAMPP81172 84 aa10.38□□□□□ -0.75
BRD9-208ENST00000489816 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
BRD9-208ENST00000489816 VPREB1P12018 145 aa10.37□□□□□ -0.75
BRD9-208ENST00000489816 DEFB105AQ8NG35 78 aa10.37□□□□□ -0.75
BRD9-208ENST00000489816 CYSTM1Q9H1C7 97 aa10.37□□□□□ -0.75
BRD9-208ENST00000489816 Q6JHZ5 121 aa10.37□□□□□ -0.75
BRD9-208ENST00000489816 COX7BP24311 80 aa10.36□□□□□ -0.75
BRD9-208ENST00000489816 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
BRD9-208ENST00000489816 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
BRD9-208ENST00000489816 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
BRD9-208ENST00000489816 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
BRD9-208ENST00000489816 GVQW2A0A096LPI5 108 aaPredicted RBP10.34□□□□□ -0.75
BRD9-208ENST00000489816 NDUFC2-KCTD14E9PQ53 114 aa10.34□□□□□ -0.75
BRD9-208ENST00000489816 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
BRD9-208ENST00000489816 Q6ZQT0 140 aa10.34□□□□□ -0.75
BRD9-208ENST00000489816 EGFEM1PQ0D2K5 195 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 SYCNQ0VAF6 134 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 COL7A1Q02388 2944 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 CMYA5Q8N3K9 4069 aa10.33□□□□□ -0.76
BRD9-208ENST00000489816 LYSTQ99698 3801 aa10.32□□□□□ -0.76
BRD9-208ENST00000489816 UQCRQO14949 82 aa10.32□□□□□ -0.76
BRD9-208ENST00000489816 C2orf48Q96LS8 159 aa10.32□□□□□ -0.76
BRD9-208ENST00000489816 COX7CP15954 63 aa10.31□□□□□ -0.76
BRD9-208ENST00000489816 ATOX1O00244 68 aa10.3□□□□□ -0.76
BRD9-208ENST00000489816 M0R378 163 aa10.3□□□□□ -0.76
BRD9-208ENST00000489816 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
BRD9-208ENST00000489816 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
BRD9-208ENST00000489816 H3BNG1 76 aa10.29□□□□□ -0.76
BRD9-208ENST00000489816 UPK3BQ9BT76 320 aa10.29□□□□□ -0.76
BRD9-208ENST00000489816 LINC00588Q9Y4M8 146 aa10.29□□□□□ -0.76
BRD9-208ENST00000489816 ELOF1P60002 83 aaKnown RBP10.29□□□□□ -0.76
BRD9-208ENST00000489816 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
BRD9-208ENST00000489816 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
BRD9-208ENST00000489816 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
BRD9-208ENST00000489816 GHRHP01286 108 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms