RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
CPSF7-212ENST00000489728 LINC00158P58513 81 aa6.85□□□□□ -1.31
CPSF7-212ENST00000489728 UBE2BP63146 152 aa6.85□□□□□ -1.31
CPSF7-212ENST00000489728 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
CPSF7-212ENST00000489728 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
CPSF7-212ENST00000489728 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
CPSF7-212ENST00000489728 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
CPSF7-212ENST00000489728 OXTP01178 125 aa6.84□□□□□ -1.31
CPSF7-212ENST00000489728 HNRNPA3P51991 378 aaKnown RBP6.84□□□□□ -1.31
CPSF7-212ENST00000489728 SPINK6Q6UWN8 80 aa6.84□□□□□ -1.31
CPSF7-212ENST00000489728 KRTAP29-1A8MX34 341 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-212ENST00000489728 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
CPSF7-212ENST00000489728 VPREB1P12018 145 aa6.83□□□□□ -1.32
CPSF7-212ENST00000489728 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
CPSF7-212ENST00000489728 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
CPSF7-212ENST00000489728 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-212ENST00000489728 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
CPSF7-212ENST00000489728 SRSF9Q13242 221 aaKnown RBP eCLIP6.82□□□□□ -1.32
CPSF7-212ENST00000489728 C1orf137Q5JT78 98 aa6.82□□□□□ -1.32
CPSF7-212ENST00000489728 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
CPSF7-212ENST00000489728 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
CPSF7-212ENST00000489728 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
CPSF7-212ENST00000489728 C5orf52A6NGY3 159 aa6.81□□□□□ -1.32
CPSF7-212ENST00000489728 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
CPSF7-212ENST00000489728 TIMM17BO60830 172 aa6.8□□□□□ -1.32
CPSF7-212ENST00000489728 KRTAP11-1Q8IUC1 163 aa6.8□□□□□ -1.32
CPSF7-212ENST00000489728 LINC00167Q96N53 147 aa6.8□□□□□ -1.32
CPSF7-212ENST00000489728 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
CPSF7-212ENST00000489728 A0A0J9YXY3 114 aa6.79□□□□□ -1.32
CPSF7-212ENST00000489728 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
CPSF7-212ENST00000489728 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
CPSF7-212ENST00000489728 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 M0R378 163 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 BOD1L2Q8IYS8 172 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 DIRC1Q969H9 104 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 MIEN1Q9BRT3 115 aa6.78□□□□□ -1.32
CPSF7-212ENST00000489728 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-212ENST00000489728 BCE1O60756 84 aa6.77□□□□□ -1.33
CPSF7-212ENST00000489728 NDUFC2O95298 119 aa6.77□□□□□ -1.33
CPSF7-212ENST00000489728 Q8NDZ9 215 aa6.77□□□□□ -1.33
CPSF7-212ENST00000489728 TRBV10-2A0A0K0K1G8 114 aa6.76□□□□□ -1.33
CPSF7-212ENST00000489728 GAGE10A6NGK3 116 aa6.76□□□□□ -1.33
CPSF7-212ENST00000489728 RPL37AP8A6NKH3 93 aa6.76□□□□□ -1.33
CPSF7-212ENST00000489728 J3QL48 77 aa6.76□□□□□ -1.33
CPSF7-212ENST00000489728 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
CPSF7-212ENST00000489728 HSBP1L1C9JCN9 74 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 H0Y9J4 135 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 ZNF861PO60384 105 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
CPSF7-212ENST00000489728 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 LITAFQ99732 161 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
CPSF7-212ENST00000489728 SPANXB1Q9NS25 103 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-212ENST00000489728 IGKV2-28A0A075B6P5 120 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 IGKV2D-28P01615 120 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 DAND5Q8N907 189 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 COPS9Q8WXC6 57 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
CPSF7-212ENST00000489728 TMEM238C9JI98 176 aa6.73□□□□□ -1.33
CPSF7-212ENST00000489728 S100A12P80511 92 aa6.73□□□□□ -1.33
CPSF7-212ENST00000489728 SCGB1D4Q6XE38 83 aa6.73□□□□□ -1.33
CPSF7-212ENST00000489728 Q6ZVH6 145 aa6.73□□□□□ -1.33
CPSF7-212ENST00000489728 TMEM126AQ9H061 195 aa6.73□□□□□ -1.33
CPSF7-212ENST00000489728 PRYO14603 147 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 SPANXDQ9BXN6 97 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 CBY1Q9Y3M2 126 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
CPSF7-212ENST00000489728 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.33
CPSF7-212ENST00000489728 NCR3O14931 201 aa6.71□□□□□ -1.34
CPSF7-212ENST00000489728 SCGB1D1O95968 90 aa6.71□□□□□ -1.34
CPSF7-212ENST00000489728 UBE2AP49459 152 aa6.71□□□□□ -1.34
CPSF7-212ENST00000489728 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.34
CPSF7-212ENST00000489728 IFITM1P13164 125 aa6.7□□□□□ -1.34
CPSF7-212ENST00000489728 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
CPSF7-212ENST00000489728 PCP2Q8IVA1 136 aa6.7□□□□□ -1.34
CPSF7-212ENST00000489728 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
CPSF7-212ENST00000489728 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
CPSF7-212ENST00000489728 IGLV6-57P01721 117 aa6.69□□□□□ -1.34
CPSF7-212ENST00000489728 MT1HL1P0DM35 61 aa6.69□□□□□ -1.34
CPSF7-212ENST00000489728 DDTP30046 118 aa6.69□□□□□ -1.34
CPSF7-212ENST00000489728 SPRR1AP35321 89 aa6.69□□□□□ -1.34
CPSF7-212ENST00000489728 FAM19A1Q7Z5A9 133 aa6.68□□□□□ -1.34
CPSF7-212ENST00000489728 LINC00518Q8N0U6 118 aa6.68□□□□□ -1.34
CPSF7-212ENST00000489728 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-212ENST00000489728 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
CPSF7-212ENST00000489728 NPC2P61916 151 aa6.67□□□□□ -1.34
CPSF7-212ENST00000489728 JOSD1Q15040 202 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-212ENST00000489728 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
CPSF7-212ENST00000489728 HERC1Q15751 4861 aa6.66□□□□□ -1.34
CPSF7-212ENST00000489728 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-212ENST00000489728 RPL13AP40429 203 aaKnown RBP6.66□□□□□ -1.34
CPSF7-212ENST00000489728 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
CPSF7-212ENST00000489728 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
CPSF7-212ENST00000489728 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms