RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 VPREB1P12018 145 aa5.96□□□□□ -1.46
HDAC6-233ENST00000489352 RAB5AP20339 215 aa5.96□□□□□ -1.46
HDAC6-233ENST00000489352 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
HDAC6-233ENST00000489352 VCX2Q9H322 139 aa5.96□□□□□ -1.46
HDAC6-233ENST00000489352 MT-ND4LP03901 98 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 HERVK_113P63121 156 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 SEC11AP67812 179 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 FAM19A3Q7Z5A8 133 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 ANAPC16Q96DE5 110 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 SMCO4Q9NRQ5 59 aa5.95□□□□□ -1.46
HDAC6-233ENST00000489352 K7EN84 100 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 CKS2P33552 79 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 PFN2P35080 140 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 COX7B2Q8TF08 81 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 CDKN2A-AS1Q9UH64 79 aa5.94□□□□□ -1.46
HDAC6-233ENST00000489352 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
HDAC6-233ENST00000489352 RIGQ13278 110 aa5.93□□□□□ -1.46
HDAC6-233ENST00000489352 TRBV24-1A0A075B6N3 115 aa5.92□□□□□ -1.46
HDAC6-233ENST00000489352 ETDCA0A1B0GVM5 59 aa5.92□□□□□ -1.46
HDAC6-233ENST00000489352 ATP5LO75964 103 aa5.92□□□□□ -1.46
HDAC6-233ENST00000489352 MRPL51Q4U2R6 128 aaKnown RBP5.92□□□□□ -1.46
HDAC6-233ENST00000489352 ZC2HC1BQ5TFG8 222 aa5.92□□□□□ -1.46
HDAC6-233ENST00000489352 OSTCQ9NRP0 149 aa5.92□□□□□ -1.46
HDAC6-233ENST00000489352 S100PP25815 95 aa5.91□□□□□ -1.46
HDAC6-233ENST00000489352 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
HDAC6-233ENST00000489352 CT83Q5H943 113 aa5.9□□□□□ -1.46
HDAC6-233ENST00000489352 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
HDAC6-233ENST00000489352 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 PDZD11Q5EBL8 140 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 FAM104BQ5XKR9 115 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 C2orf66Q6UXQ4 117 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
HDAC6-233ENST00000489352 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
HDAC6-233ENST00000489352 AMELXQ99217 191 aa5.88□□□□□ -1.47
HDAC6-233ENST00000489352 V9GYV3 84 aa5.88□□□□□ -1.47
HDAC6-233ENST00000489352 TRAV9-1A0A075B6T8 112 aa5.87□□□□□ -1.47
HDAC6-233ENST00000489352 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
HDAC6-233ENST00000489352 SMIM1B2RUZ4 78 aa5.87□□□□□ -1.47
HDAC6-233ENST00000489352 PRYO14603 147 aa5.87□□□□□ -1.47
HDAC6-233ENST00000489352 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
HDAC6-233ENST00000489352 COLCA2A8K830 154 aa5.86□□□□□ -1.47
HDAC6-233ENST00000489352 PRSS47A8MTI9 375 aa5.86□□□□□ -1.47
HDAC6-233ENST00000489352 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
HDAC6-233ENST00000489352 CYSLTR1Q9Y271 337 aa5.86□□□□□ -1.47
HDAC6-233ENST00000489352 KMT2DO14686 5537 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 D6R8Y8 96 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 S100A12P80511 92 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
HDAC6-233ENST00000489352 COX19Q49B96 90 aa5.84□□□□□ -1.47
HDAC6-233ENST00000489352 NPYP01303 97 aa5.83□□□□□ -1.48
HDAC6-233ENST00000489352 S100A8P05109 93 aa5.83□□□□□ -1.48
HDAC6-233ENST00000489352 ERG28Q9UKR5 140 aa5.83□□□□□ -1.48
HDAC6-233ENST00000489352 ERC2-IT1O76042 136 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 COX17Q14061 63 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 KIAA1644Q3SXP7 199 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 ATP5L2Q7Z4Y8 100 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 Q8NDZ9 215 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
HDAC6-233ENST00000489352 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
HDAC6-233ENST00000489352 A0A1B0GW15 77 aa5.81□□□□□ -1.48
HDAC6-233ENST00000489352 SPINK8P0C7L1 97 aa5.81□□□□□ -1.48
HDAC6-233ENST00000489352 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
HDAC6-233ENST00000489352 MRPL54Q6P161 138 aaKnown RBP5.81□□□□□ -1.48
HDAC6-233ENST00000489352 CHTOPQ9Y3Y2 248 aaKnown RBP5.81□□□□□ -1.48
HDAC6-233ENST00000489352 PPBPP02775 128 aa5.8□□□□□ -1.48
HDAC6-233ENST00000489352 SPRR1AP35321 89 aa5.8□□□□□ -1.48
HDAC6-233ENST00000489352 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
HDAC6-233ENST00000489352 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
HDAC6-233ENST00000489352 TRAPPC1Q9Y5R8 145 aa5.8□□□□□ -1.48
HDAC6-233ENST00000489352 LOC105371267A0A1B0GV96 52 aa5.79□□□□□ -1.48
HDAC6-233ENST00000489352 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
HDAC6-233ENST00000489352 TRGC2P03986 189 aa5.78□□□□□ -1.48
HDAC6-233ENST00000489352 C6orf99Q4VX62 202 aa5.78□□□□□ -1.48
HDAC6-233ENST00000489352 TINCRA0A1B0GVN0 87 aa5.77□□□□□ -1.49
HDAC6-233ENST00000489352 B5MCH6 92 aa5.77□□□□□ -1.49
HDAC6-233ENST00000489352 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
HDAC6-233ENST00000489352 TMEM136Q6ZRR5 245 aa5.77□□□□□ -1.49
HDAC6-233ENST00000489352 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
HDAC6-233ENST00000489352 ZNF625Q96I27 306 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-233ENST00000489352 MRPL18Q9H0U6 180 aaKnown RBP5.77□□□□□ -1.49
HDAC6-233ENST00000489352 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 H3BRM9 83 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 H7C2G1 150 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 S100A6P06703 90 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 ORMDL2Q53FV1 153 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 C1orf195Q5TG92 126 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 PRELID3AQ96N28 172 aa5.76□□□□□ -1.49
HDAC6-233ENST00000489352 NCR3O14931 201 aa5.75□□□□□ -1.49
HDAC6-233ENST00000489352 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
HDAC6-233ENST00000489352 TMEM238LA0A1B0GVL6 79 aa5.74□□□□□ -1.49
HDAC6-233ENST00000489352 LINC00158P58513 81 aa5.74□□□□□ -1.49
HDAC6-233ENST00000489352 Q9BRP9 147 aa5.74□□□□□ -1.49
HDAC6-233ENST00000489352 MAP1LC3AQ9H492 121 aa5.74□□□□□ -1.49
HDAC6-233ENST00000489352 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms