RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HERVK_113P61574 105 aa5.53□□□□□ -1.52
HDAC6-232ENST00000489053 S100A12P80511 92 aa5.53□□□□□ -1.52
HDAC6-232ENST00000489053 MAP1LC3CQ9BXW4 147 aa5.53□□□□□ -1.52
HDAC6-232ENST00000489053 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
HDAC6-232ENST00000489053 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
HDAC6-232ENST00000489053 FABP4P15090 132 aa5.52□□□□□ -1.53
HDAC6-232ENST00000489053 HERV-K104P63124 156 aa5.52□□□□□ -1.53
HDAC6-232ENST00000489053 DPM2O94777 84 aa5.51□□□□□ -1.53
HDAC6-232ENST00000489053 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
HDAC6-232ENST00000489053 PLEKHB2Q96CS7 222 aa5.51□□□□□ -1.53
HDAC6-232ENST00000489053 NDUFA12Q9UI09 145 aa5.51□□□□□ -1.53
HDAC6-232ENST00000489053 SCO1O75880 301 aa5.5□□□□□ -1.53
HDAC6-232ENST00000489053 SMIM13P0DJ93 91 aa5.5□□□□□ -1.53
HDAC6-232ENST00000489053 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
HDAC6-232ENST00000489053 CRYGAP11844 174 aa5.49□□□□□ -1.53
HDAC6-232ENST00000489053 VPREB1P12018 145 aa5.49□□□□□ -1.53
HDAC6-232ENST00000489053 LGALS3P17931 250 aaKnown RBP5.49□□□□□ -1.53
HDAC6-232ENST00000489053 S100A1P23297 94 aa5.49□□□□□ -1.53
HDAC6-232ENST00000489053 BOD1L2Q8IYS8 172 aa5.49□□□□□ -1.53
HDAC6-232ENST00000489053 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
HDAC6-232ENST00000489053 COLCA2A8K830 154 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 M0R378 163 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 LEPROTO15243 131 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 IGKCP01834 107 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 PRLHP81277 87 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
HDAC6-232ENST00000489053 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
HDAC6-232ENST00000489053 NMUP48645 174 aa5.47□□□□□ -1.53
HDAC6-232ENST00000489053 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
HDAC6-232ENST00000489053 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
HDAC6-232ENST00000489053 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 J3QQQ9 107 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 NCR3O14931 201 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 LRP2P98164 4655 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
HDAC6-232ENST00000489053 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
HDAC6-232ENST00000489053 PRR4Q16378 134 aa5.45□□□□□ -1.54
HDAC6-232ENST00000489053 ZNF706Q9Y5V0 76 aaPredicted RBP5.45□□□□□ -1.54
HDAC6-232ENST00000489053 PRYO14603 147 aa5.44□□□□□ -1.54
HDAC6-232ENST00000489053 TSPAN13O95857 204 aa5.44□□□□□ -1.54
HDAC6-232ENST00000489053 LINC00310P59036 64 aa5.44□□□□□ -1.54
HDAC6-232ENST00000489053 FAM229BQ4G0N7 80 aa5.44□□□□□ -1.54
HDAC6-232ENST00000489053 S100A7L2Q5SY68 101 aa5.43□□□□□ -1.54
HDAC6-232ENST00000489053 DAND5Q8N907 189 aa5.43□□□□□ -1.54
HDAC6-232ENST00000489053 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
HDAC6-232ENST00000489053 C20orf202A1L168 122 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BKO60814 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BJP06899 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BOP23527 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BBP33778 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BDP58876 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 TSPEAR-AS2P59090 65 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BCP62807 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST2H2BEQ16778 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BHQ93079 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BNQ99877 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 HIST1H2BMQ99879 126 aa5.42□□□□□ -1.54
HDAC6-232ENST00000489053 A0A087X002 238 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 DDTP30046 118 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 PET117Q6UWS5 81 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 Q8NDZ9 215 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
HDAC6-232ENST00000489053 CBY1Q9Y3M2 126 aa5.41□□□□□ -1.54
HDAC6-232ENST00000489053 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 E9PLD3 99 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 KRTDAPP60985 99 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 NPC2P61916 151 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
HDAC6-232ENST00000489053 TRBV10-2A0A0K0K1G8 114 aa5.39□□□□□ -1.55
HDAC6-232ENST00000489053 HINT1P49773 126 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-232ENST00000489053 KCNQ1DNQ9H478 68 aa5.39□□□□□ -1.55
HDAC6-232ENST00000489053 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
HDAC6-232ENST00000489053 AKR1D1P51857 326 aa5.38□□□□□ -1.55
HDAC6-232ENST00000489053 JOSD1Q15040 202 aaPredicted RBP5.38□□□□□ -1.55
HDAC6-232ENST00000489053 OR13C6PQ8NH95 151 aa5.38□□□□□ -1.55
HDAC6-232ENST00000489053 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
HDAC6-232ENST00000489053 NDUFC2O95298 119 aa5.37□□□□□ -1.55
HDAC6-232ENST00000489053 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
HDAC6-232ENST00000489053 SCGB1D4Q6XE38 83 aa5.37□□□□□ -1.55
HDAC6-232ENST00000489053 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
HDAC6-232ENST00000489053 TRAV23DV6A0A075B6W5 121 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 LOC107984156A0A0G2JMH3 177 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 ARL17AQ8IVW1 177 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 SMCR5Q8TEV8 140 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
HDAC6-232ENST00000489053 C3orf79P0CE67 100 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 S100A2P29034 98 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 SPANXCQ9NY87 97 aa5.35□□□□□ -1.55
HDAC6-232ENST00000489053 TIMM17BO60830 172 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms