RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
SPEN-205ENST00000487496 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
SPEN-205ENST00000487496 SCO1O75880 301 aa6.85□□□□□ -1.31
SPEN-205ENST00000487496 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
SPEN-205ENST00000487496 VPREB1P12018 145 aa6.84□□□□□ -1.31
SPEN-205ENST00000487496 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
SPEN-205ENST00000487496 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
SPEN-205ENST00000487496 RPL13AP40429 203 aaKnown RBP6.83□□□□□ -1.32
SPEN-205ENST00000487496 LINC00310P59036 64 aa6.83□□□□□ -1.32
SPEN-205ENST00000487496 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
SPEN-205ENST00000487496 COLCA2A8K830 154 aa6.82□□□□□ -1.32
SPEN-205ENST00000487496 SERF1AO75920 110 aa6.82□□□□□ -1.32
SPEN-205ENST00000487496 LINC00158P58513 81 aa6.82□□□□□ -1.32
SPEN-205ENST00000487496 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
SPEN-205ENST00000487496 Q8NDZ9 215 aa6.82□□□□□ -1.32
SPEN-205ENST00000487496 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
SPEN-205ENST00000487496 H0Y8G0 127 aa6.81□□□□□ -1.32
SPEN-205ENST00000487496 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
SPEN-205ENST00000487496 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
SPEN-205ENST00000487496 LRP2P98164 4655 aa6.8□□□□□ -1.32
SPEN-205ENST00000487496 UBE2AP49459 152 aa6.8□□□□□ -1.32
SPEN-205ENST00000487496 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
SPEN-205ENST00000487496 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
SPEN-205ENST00000487496 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
SPEN-205ENST00000487496 A0A087X002 238 aa6.78□□□□□ -1.32
SPEN-205ENST00000487496 HERV-K104P63124 156 aa6.78□□□□□ -1.32
SPEN-205ENST00000487496 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
SPEN-205ENST00000487496 HSPB8Q9UJY1 196 aa6.78□□□□□ -1.32
SPEN-205ENST00000487496 M0R378 163 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 ATP6V1G1O75348 118 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 CRYGAP11844 174 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 FABP4P15090 132 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 PRLHP81277 87 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
SPEN-205ENST00000487496 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
SPEN-205ENST00000487496 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
SPEN-205ENST00000487496 LCE2BO14633 110 aa6.76□□□□□ -1.33
SPEN-205ENST00000487496 LEPROTO15243 131 aa6.75□□□□□ -1.33
SPEN-205ENST00000487496 PLNP26678 52 aa6.75□□□□□ -1.33
SPEN-205ENST00000487496 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
SPEN-205ENST00000487496 BOD1L2Q8IYS8 172 aa6.75□□□□□ -1.33
SPEN-205ENST00000487496 PMCHL2Q9BQD1 86 aa6.75□□□□□ -1.33
SPEN-205ENST00000487496 DPM2O94777 84 aa6.74□□□□□ -1.33
SPEN-205ENST00000487496 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
SPEN-205ENST00000487496 PLEKHB2Q96CS7 222 aa6.74□□□□□ -1.33
SPEN-205ENST00000487496 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
SPEN-205ENST00000487496 IGKCP01834 107 aa6.73□□□□□ -1.33
SPEN-205ENST00000487496 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
SPEN-205ENST00000487496 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
SPEN-205ENST00000487496 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
SPEN-205ENST00000487496 J3QQQ9 107 aa6.72□□□□□ -1.33
SPEN-205ENST00000487496 TSPAN13O95857 204 aa6.72□□□□□ -1.33
SPEN-205ENST00000487496 HERVK_113P61574 105 aa6.72□□□□□ -1.33
SPEN-205ENST00000487496 LPAP08519 4548 aa6.72□□□□□ -1.33
SPEN-205ENST00000487496 H3BS24 57 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 NCR3O14931 201 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BKO60814 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BJP06899 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BOP23527 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BBP33778 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BDP58876 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BCP62807 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST2H2BEQ16778 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.71□□□□□ -1.34
SPEN-205ENST00000487496 DAND5Q8N907 189 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BHQ93079 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BNQ99877 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 HIST1H2BMQ99879 126 aa6.71□□□□□ -1.34
SPEN-205ENST00000487496 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 PRYO14603 147 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 LGALS3P17931 250 aaKnown RBP6.7□□□□□ -1.34
SPEN-205ENST00000487496 NMUP48645 174 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 PRR4Q16378 134 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 HIGD2AQ9BW72 106 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 KCNQ1DNQ9H478 68 aa6.7□□□□□ -1.34
SPEN-205ENST00000487496 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
SPEN-205ENST00000487496 A4D1N5 150 aa6.69□□□□□ -1.34
SPEN-205ENST00000487496 SPRR1AP35321 89 aa6.69□□□□□ -1.34
SPEN-205ENST00000487496 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
SPEN-205ENST00000487496 SYS1-DBNDD2H3BUS1 97 aa6.68□□□□□ -1.34
SPEN-205ENST00000487496 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
SPEN-205ENST00000487496 E9PLD3 99 aa6.67□□□□□ -1.34
SPEN-205ENST00000487496 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
SPEN-205ENST00000487496 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
SPEN-205ENST00000487496 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
SPEN-205ENST00000487496 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
SPEN-205ENST00000487496 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
SPEN-205ENST00000487496 MIEN1Q9BRT3 115 aa6.66□□□□□ -1.34
SPEN-205ENST00000487496 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 S100A12P80511 92 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 LINC01545Q5VT33 79 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 C3orf22Q8N5N4 141 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.34
SPEN-205ENST00000487496 NDUFC2O95298 119 aa6.64□□□□□ -1.35
SPEN-205ENST00000487496 DDTP30046 118 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms