RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 A0A087X002 238 aa12.64□□□□□ -0.39
RPL35-203ENST00000487431 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
RPL35-203ENST00000487431 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
RPL35-203ENST00000487431 TMEM170BQ5T4T1 132 aa12.64□□□□□ -0.39
RPL35-203ENST00000487431 LINC00167Q96N53 147 aa12.64□□□□□ -0.39
RPL35-203ENST00000487431 PLNP26678 52 aa12.63□□□□□ -0.39
RPL35-203ENST00000487431 COX7B2Q8TF08 81 aa12.63□□□□□ -0.39
RPL35-203ENST00000487431 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
RPL35-203ENST00000487431 SPINK8P0C7L1 97 aa12.61□□□□□ -0.39
RPL35-203ENST00000487431 S100A2P29034 98 aa12.61□□□□□ -0.39
RPL35-203ENST00000487431 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
RPL35-203ENST00000487431 DPM2O94777 84 aa12.6□□□□□ -0.39
RPL35-203ENST00000487431 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
RPL35-203ENST00000487431 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
RPL35-203ENST00000487431 CRYGAP11844 174 aa12.59□□□□□ -0.39
RPL35-203ENST00000487431 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
RPL35-203ENST00000487431 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
RPL35-203ENST00000487431 IGLV5-39A0A0G2JS06 123 aa12.57□□□□□ -0.4
RPL35-203ENST00000487431 TSPAN13O95857 204 aa12.57□□□□□ -0.4
RPL35-203ENST00000487431 IGKCP01834 107 aa12.57□□□□□ -0.4
RPL35-203ENST00000487431 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
RPL35-203ENST00000487431 KRTDAPP60985 99 aa12.56□□□□□ -0.4
RPL35-203ENST00000487431 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
RPL35-203ENST00000487431 C20orf202A1L168 122 aa12.55□□□□□ -0.4
RPL35-203ENST00000487431 C3orf79P0CE67 100 aa12.55□□□□□ -0.4
RPL35-203ENST00000487431 GAGE10A6NGK3 116 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 AKR1D1P51857 326 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 HERVK_113P61574 105 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
RPL35-203ENST00000487431 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
RPL35-203ENST00000487431 KRTAP13-2Q52LG2 175 aa12.53□□□□□ -0.4
RPL35-203ENST00000487431 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
RPL35-203ENST00000487431 HIST1H2BLQ99880 126 aa12.53□□□□□ -0.4
RPL35-203ENST00000487431 FAM229BQ4G0N7 80 aa12.52□□□□□ -0.41
RPL35-203ENST00000487431 C5orf52A6NGY3 159 aa12.51□□□□□ -0.41
RPL35-203ENST00000487431 ANAPC11Q9NYG5 84 aa12.5□□□□□ -0.41
RPL35-203ENST00000487431 UBE2AP49459 152 aa12.49□□□□□ -0.41
RPL35-203ENST00000487431 PLEKHB2Q96CS7 222 aa12.48□□□□□ -0.41
RPL35-203ENST00000487431 A0A0U1RQV1 116 aa12.47□□□□□ -0.41
RPL35-203ENST00000487431 IGKV2-28A0A075B6P5 120 aa12.46□□□□□ -0.41
RPL35-203ENST00000487431 LEPROTO15243 131 aa12.46□□□□□ -0.41
RPL35-203ENST00000487431 IGKV2D-28P01615 120 aa12.46□□□□□ -0.41
RPL35-203ENST00000487431 VPREB1P12018 145 aa12.46□□□□□ -0.41
RPL35-203ENST00000487431 PFN2P35080 140 aa12.45□□□□□ -0.42
RPL35-203ENST00000487431 CTAG1AP78358 180 aa12.44□□□□□ -0.42
RPL35-203ENST00000487431 COX17Q14061 63 aa12.44□□□□□ -0.42
RPL35-203ENST00000487431 SND1-IT1Q9HBX3 110 aa12.44□□□□□ -0.42
RPL35-203ENST00000487431 LINC00304Q8N9R0 145 aa12.43□□□□□ -0.42
RPL35-203ENST00000487431 TMEM126AQ9H061 195 aa12.43□□□□□ -0.42
RPL35-203ENST00000487431 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
RPL35-203ENST00000487431 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
RPL35-203ENST00000487431 E9PLD3 99 aa12.42□□□□□ -0.42
RPL35-203ENST00000487431 HERV-K104P63124 156 aa12.42□□□□□ -0.42
RPL35-203ENST00000487431 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
RPL35-203ENST00000487431 J3QQQ9 107 aa12.41□□□□□ -0.42
RPL35-203ENST00000487431 LGALS3P17931 250 aaKnown RBP12.41□□□□□ -0.42
RPL35-203ENST00000487431 NMUP48645 174 aa12.41□□□□□ -0.42
RPL35-203ENST00000487431 PRLHP81277 87 aa12.41□□□□□ -0.42
RPL35-203ENST00000487431 NDUFA12Q9UI09 145 aa12.41□□□□□ -0.42
RPL35-203ENST00000487431 TMA7Q9Y2S6 64 aaKnown RBP12.41□□□□□ -0.42
RPL35-203ENST00000487431 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
RPL35-203ENST00000487431 RPL24P83731 157 aaKnown RBP12.4□□□□□ -0.42
RPL35-203ENST00000487431 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
RPL35-203ENST00000487431 IGKV2D-26A0A0A0MRZ7 120 aa12.39□□□□□ -0.43
RPL35-203ENST00000487431 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
RPL35-203ENST00000487431 M0R378 163 aa12.39□□□□□ -0.43
RPL35-203ENST00000487431 RETNLBQ9BQ08 111 aa12.39□□□□□ -0.43
RPL35-203ENST00000487431 FAT4Q6V0I7 4981 aa12.38□□□□□ -0.43
RPL35-203ENST00000487431 Q8NDZ9 215 aa12.38□□□□□ -0.43
RPL35-203ENST00000487431 MUC17Q685J3 4493 aa12.37□□□□□ -0.43
RPL35-203ENST00000487431 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
RPL35-203ENST00000487431 TPRXLQ17RH7 258 aa12.37□□□□□ -0.43
RPL35-203ENST00000487431 LCE2AQ5TA79 106 aaPredicted RBP12.36□□□□□ -0.43
RPL35-203ENST00000487431 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
RPL35-203ENST00000487431 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
RPL35-203ENST00000487431 HSBP1L1C9JCN9 74 aa12.34□□□□□ -0.43
RPL35-203ENST00000487431 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
RPL35-203ENST00000487431 LINC00158P58513 81 aa12.33□□□□□ -0.44
RPL35-203ENST00000487431 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
RPL35-203ENST00000487431 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
RPL35-203ENST00000487431 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
RPL35-203ENST00000487431 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
RPL35-203ENST00000487431 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
RPL35-203ENST00000487431 ANKRD39Q53RE8 183 aa12.28□□□□□ -0.44
RPL35-203ENST00000487431 SPAG11AQ6PDA7 123 aa12.27□□□□□ -0.45
RPL35-203ENST00000487431 SPRR4Q96PI1 79 aa12.27□□□□□ -0.45
RPL35-203ENST00000487431 HIGD2AQ9BW72 106 aa12.27□□□□□ -0.45
RPL35-203ENST00000487431 KRTAP9-2Q9BYQ4 174 aa12.27□□□□□ -0.45
RPL35-203ENST00000487431 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
RPL35-203ENST00000487431 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
RPL35-203ENST00000487431 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
RPL35-203ENST00000487431 MIR7-3HGQ8N6C7 128 aa12.25□□□□□ -0.45
RPL35-203ENST00000487431 TIMM17BO60830 172 aa12.23□□□□□ -0.45
RPL35-203ENST00000487431 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
RPL35-203ENST00000487431 PRYO14603 147 aa12.21□□□□□ -0.45
RPL35-203ENST00000487431 SPRR1AP35321 89 aa12.21□□□□□ -0.45
RPL35-203ENST00000487431 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.45
RPL35-203ENST00000487431 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms