RNA–Protein interactions for RNA: ENST00000485449.1

CBX8-204, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 581 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-204ENST00000485449 SMIM13P0DJ93 91 aa12□□□□□ -0.49
CBX8-204ENST00000485449 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
CBX8-204ENST00000485449 NMUP48645 174 aa12□□□□□ -0.49
CBX8-204ENST00000485449 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
CBX8-204ENST00000485449 MEIG1Q5JSS6 88 aa12□□□□□ -0.49
CBX8-204ENST00000485449 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
CBX8-204ENST00000485449 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
CBX8-204ENST00000485449 S100A2P29034 98 aa11.99□□□□□ -0.49
CBX8-204ENST00000485449 MRPL55Q7Z7F7 128 aaKnown RBP11.99□□□□□ -0.49
CBX8-204ENST00000485449 C20orf202A1L168 122 aa11.98□□□□□ -0.49
CBX8-204ENST00000485449 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
CBX8-204ENST00000485449 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
CBX8-204ENST00000485449 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
CBX8-204ENST00000485449 NKAPP1Q8N9T2 125 aa11.96□□□□□ -0.49
CBX8-204ENST00000485449 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
CBX8-204ENST00000485449 VPREB1P12018 145 aa11.95□□□□□ -0.5
CBX8-204ENST00000485449 MIR7-3HGQ8N6C7 128 aa11.95□□□□□ -0.5
CBX8-204ENST00000485449 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
CBX8-204ENST00000485449 LRP1Q07954 4544 aaKnown RBP11.94□□□□□ -0.5
CBX8-204ENST00000485449 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
CBX8-204ENST00000485449 RPL24P83731 157 aaKnown RBP11.94□□□□□ -0.5
CBX8-204ENST00000485449 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
CBX8-204ENST00000485449 FAT3Q8TDW7 4589 aa11.94□□□□□ -0.5
CBX8-204ENST00000485449 AKR1D1P51857 326 aa11.93□□□□□ -0.5
CBX8-204ENST00000485449 GAGE10A6NGK3 116 aa11.92□□□□□ -0.5
CBX8-204ENST00000485449 OXTP01178 125 aa11.92□□□□□ -0.5
CBX8-204ENST00000485449 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
CBX8-204ENST00000485449 Q8NDZ9 215 aa11.92□□□□□ -0.5
CBX8-204ENST00000485449 RPL37AP8A6NKH3 93 aa11.91□□□□□ -0.5
CBX8-204ENST00000485449 DMBT1Q9UGM3 2413 aaPredicted RBP11.91□□□□□ -0.5
CBX8-204ENST00000485449 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.5
CBX8-204ENST00000485449 A0A0J9YXY3 114 aa11.9□□□□□ -0.5
CBX8-204ENST00000485449 C5orf52A6NGY3 159 aa11.9□□□□□ -0.5
CBX8-204ENST00000485449 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
CBX8-204ENST00000485449 DAND5Q8N907 189 aa11.89□□□□□ -0.51
CBX8-204ENST00000485449 J3QL48 77 aa11.88□□□□□ -0.51
CBX8-204ENST00000485449 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
CBX8-204ENST00000485449 IGLV1-50A0A075B6I6 118 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
CBX8-204ENST00000485449 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
CBX8-204ENST00000485449 TTTY13Q9BZ97 58 aa11.85□□□□□ -0.51
CBX8-204ENST00000485449 M0R378 163 aa11.84□□□□□ -0.51
CBX8-204ENST00000485449 BCE1O60756 84 aa11.84□□□□□ -0.51
CBX8-204ENST00000485449 ADAMTSL4-AS1Q5T5F5 129 aa11.84□□□□□ -0.51
CBX8-204ENST00000485449 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
CBX8-204ENST00000485449 DIRC1Q969H9 104 aa11.84□□□□□ -0.51
CBX8-204ENST00000485449 TIMM17BO60830 172 aa11.82□□□□□ -0.52
CBX8-204ENST00000485449 MIEN1Q9BRT3 115 aa11.82□□□□□ -0.52
CBX8-204ENST00000485449 H0Y9J4 135 aa11.81□□□□□ -0.52
CBX8-204ENST00000485449 ZNF861PO60384 105 aa11.81□□□□□ -0.52
CBX8-204ENST00000485449 LITAFQ99732 161 aa11.81□□□□□ -0.52
CBX8-204ENST00000485449 NCR3O14931 201 aa11.8□□□□□ -0.52
CBX8-204ENST00000485449 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
CBX8-204ENST00000485449 TMEM238C9JI98 176 aa11.78□□□□□ -0.52
CBX8-204ENST00000485449 RPL28P46779 137 aaKnown RBP11.78□□□□□ -0.52
CBX8-204ENST00000485449 NPC2P61916 151 aa11.78□□□□□ -0.52
CBX8-204ENST00000485449 SOSTDC1Q6X4U4 206 aa11.78□□□□□ -0.52
CBX8-204ENST00000485449 TMEM126AQ9H061 195 aa11.78□□□□□ -0.52
CBX8-204ENST00000485449 HERC1Q15751 4861 aa11.78□□□□□ -0.52
CBX8-204ENST00000485449 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
CBX8-204ENST00000485449 NDUFC2O95298 119 aa11.77□□□□□ -0.53
CBX8-204ENST00000485449 SCGB1D1O95968 90 aa11.77□□□□□ -0.53
CBX8-204ENST00000485449 MT1HL1P0DM35 61 aa11.77□□□□□ -0.53
CBX8-204ENST00000485449 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
CBX8-204ENST00000485449 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
CBX8-204ENST00000485449 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
CBX8-204ENST00000485449 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
CBX8-204ENST00000485449 KRTAP13-1Q8IUC0 172 aa11.75□□□□□ -0.53
CBX8-204ENST00000485449 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
CBX8-204ENST00000485449 SPANXB1Q9NS25 103 aaPredicted RBP11.75□□□□□ -0.53
CBX8-204ENST00000485449 UBE2AP49459 152 aa11.74□□□□□ -0.53
CBX8-204ENST00000485449 TRBV10-3A0A0K0K1G6 114 aa11.73□□□□□ -0.53
CBX8-204ENST00000485449 TNXBP22105 4242 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 PRYO14603 147 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 FAM19A1Q7Z5A9 133 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
CBX8-204ENST00000485449 DDTP30046 118 aa11.7□□□□□ -0.54
CBX8-204ENST00000485449 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
CBX8-204ENST00000485449 PRLHP81277 87 aa11.7□□□□□ -0.54
CBX8-204ENST00000485449 KRTAP1-4P0C5Y4 121 aa11.69□□□□□ -0.54
CBX8-204ENST00000485449 SPRR1AP35321 89 aa11.68□□□□□ -0.54
CBX8-204ENST00000485449 S100A12P80511 92 aa11.68□□□□□ -0.54
CBX8-204ENST00000485449 S100A7L2Q5SY68 101 aa11.68□□□□□ -0.54
CBX8-204ENST00000485449 TMA7Q9Y2S6 64 aaKnown RBP11.68□□□□□ -0.54
CBX8-204ENST00000485449 IGLV6-57P01721 117 aa11.67□□□□□ -0.54
CBX8-204ENST00000485449 Q6ZVH6 145 aa11.67□□□□□ -0.54
CBX8-204ENST00000485449 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
CBX8-204ENST00000485449 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
CBX8-204ENST00000485449 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.54
CBX8-204ENST00000485449 IFITM1P13164 125 aa11.65□□□□□ -0.54
CBX8-204ENST00000485449 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
CBX8-204ENST00000485449 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CBX8-204ENST00000485449 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
CBX8-204ENST00000485449 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms