RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
CPNE1-224ENST00000483359 HERC2O95714 4834 aa11.24□□□□□ -0.61
CPNE1-224ENST00000483359 KRTAP17-1Q9BYP8 105 aa11.23□□□□□ -0.61
CPNE1-224ENST00000483359 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
CPNE1-224ENST00000483359 DAND5Q8N907 189 aa11.23□□□□□ -0.61
CPNE1-224ENST00000483359 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
CPNE1-224ENST00000483359 JOSD1Q15040 202 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-224ENST00000483359 SERTAD4-AS1Q5TG53 156 aa11.22□□□□□ -0.61
CPNE1-224ENST00000483359 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
CPNE1-224ENST00000483359 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CPNE1-224ENST00000483359 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.61
CPNE1-224ENST00000483359 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.61
CPNE1-224ENST00000483359 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
CPNE1-224ENST00000483359 PHF5AQ7RTV0 110 aaKnown RBP11.19□□□□□ -0.62
CPNE1-224ENST00000483359 M0QXV9 152 aa11.18□□□□□ -0.62
CPNE1-224ENST00000483359 PAM16Q9Y3D7 125 aa11.18□□□□□ -0.62
CPNE1-224ENST00000483359 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
CPNE1-224ENST00000483359 NPC2P61916 151 aa11.17□□□□□ -0.62
CPNE1-224ENST00000483359 Q5VSD8 79 aa11.17□□□□□ -0.62
CPNE1-224ENST00000483359 Q8N1X5 172 aa11.17□□□□□ -0.62
CPNE1-224ENST00000483359 TP73-AS1Q9UF72 201 aa11.17□□□□□ -0.62
CPNE1-224ENST00000483359 ADAMTSL4-AS1Q5T5F5 129 aa11.16□□□□□ -0.62
CPNE1-224ENST00000483359 EPM2AB3EWF7 344 aa11.16□□□□□ -0.62
CPNE1-224ENST00000483359 C7orf33Q8WU49 177 aa11.16□□□□□ -0.62
CPNE1-224ENST00000483359 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
CPNE1-224ENST00000483359 Q8NDZ9 215 aa11.15□□□□□ -0.62
CPNE1-224ENST00000483359 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
CPNE1-224ENST00000483359 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
CPNE1-224ENST00000483359 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
CPNE1-224ENST00000483359 SPATA45Q537H7 98 aa11.14□□□□□ -0.63
CPNE1-224ENST00000483359 LITAFQ99732 161 aa11.14□□□□□ -0.63
CPNE1-224ENST00000483359 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
CPNE1-224ENST00000483359 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 MIEN1Q9BRT3 115 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 GAGE10A6NGK3 116 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 VPREB1P12018 145 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 UBE2BP63146 152 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
CPNE1-224ENST00000483359 RPL37AP61513 92 aaKnown RBP11.11□□□□□ -0.63
CPNE1-224ENST00000483359 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
CPNE1-224ENST00000483359 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-224ENST00000483359 TIMM17BO60830 172 aa11.1□□□□□ -0.63
CPNE1-224ENST00000483359 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
CPNE1-224ENST00000483359 M0R143 59 aa11.1□□□□□ -0.63
CPNE1-224ENST00000483359 PRR3P79522 188 aaKnown RBP11.1□□□□□ -0.63
CPNE1-224ENST00000483359 RPL24P83731 157 aaKnown RBP11.1□□□□□ -0.63
CPNE1-224ENST00000483359 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
CPNE1-224ENST00000483359 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
CPNE1-224ENST00000483359 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
CPNE1-224ENST00000483359 DLEU1O43261 78 aa11.09□□□□□ -0.63
CPNE1-224ENST00000483359 COX8AP10176 69 aa11.08□□□□□ -0.64
CPNE1-224ENST00000483359 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
CPNE1-224ENST00000483359 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
CPNE1-224ENST00000483359 NCR3O14931 201 aa11.08□□□□□ -0.64
CPNE1-224ENST00000483359 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
CPNE1-224ENST00000483359 LINC00308Q8TCZ7 52 aa11.07□□□□□ -0.64
CPNE1-224ENST00000483359 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
CPNE1-224ENST00000483359 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
CPNE1-224ENST00000483359 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
CPNE1-224ENST00000483359 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
CPNE1-224ENST00000483359 SRRM2Q9UQ35 2752 aaKnown RBP11.06□□□□□ -0.64
CPNE1-224ENST00000483359 ABCA13Q86UQ4 5058 aa11.05□□□□□ -0.64
CPNE1-224ENST00000483359 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
CPNE1-224ENST00000483359 KRTAP10-4P60372 401 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-224ENST00000483359 ARL17AQ8IVW1 177 aa11.05□□□□□ -0.64
CPNE1-224ENST00000483359 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
CPNE1-224ENST00000483359 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
CPNE1-224ENST00000483359 C1orf137Q5JT78 98 aa11.03□□□□□ -0.64
CPNE1-224ENST00000483359 SNHG12Q9BXW3 62 aa11.03□□□□□ -0.64
CPNE1-224ENST00000483359 M0R378 163 aa11.01□□□□□ -0.65
CPNE1-224ENST00000483359 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPNE1-224ENST00000483359 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
CPNE1-224ENST00000483359 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
CPNE1-224ENST00000483359 NDUFC2O95298 119 aa10.99□□□□□ -0.65
CPNE1-224ENST00000483359 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
CPNE1-224ENST00000483359 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-224ENST00000483359 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
CPNE1-224ENST00000483359 Q6ZVH6 145 aa10.98□□□□□ -0.65
CPNE1-224ENST00000483359 PCLOQ9Y6V0 5065 aa10.97□□□□□ -0.65
CPNE1-224ENST00000483359 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
CPNE1-224ENST00000483359 IFITM1P13164 125 aa10.97□□□□□ -0.65
CPNE1-224ENST00000483359 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.65
CPNE1-224ENST00000483359 SVIPQ8NHG7 77 aa10.96□□□□□ -0.65
CPNE1-224ENST00000483359 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
CPNE1-224ENST00000483359 HIST1H4GQ99525 98 aa10.96□□□□□ -0.65
CPNE1-224ENST00000483359 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.66
CPNE1-224ENST00000483359 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
CPNE1-224ENST00000483359 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
CPNE1-224ENST00000483359 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
CPNE1-224ENST00000483359 INAFM2P0DMQ5 153 aa10.93□□□□□ -0.66
CPNE1-224ENST00000483359 REG3GQ6UW15 175 aa10.93□□□□□ -0.66
CPNE1-224ENST00000483359 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
CPNE1-224ENST00000483359 HIGD1BQ9P298 99 aa10.92□□□□□ -0.66
CPNE1-224ENST00000483359 LINC00337Q8N6G1 96 aa10.92□□□□□ -0.66
CPNE1-224ENST00000483359 BCE1O60756 84 aa10.91□□□□□ -0.66
CPNE1-224ENST00000483359 IGLV6-57P01721 117 aa10.9□□□□□ -0.66
CPNE1-224ENST00000483359 A4D1N5 150 aa10.9□□□□□ -0.66
CPNE1-224ENST00000483359 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
CPNE1-224ENST00000483359 UQCR10Q9UDW1 63 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms