RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
HDAC1-207ENST00000481281 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 Q8NDZ9 215 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
HDAC1-207ENST00000481281 RPL28P46779 137 aaKnown RBP7.82□□□□□ -1.16
HDAC1-207ENST00000481281 LINC00158P58513 81 aa7.82□□□□□ -1.16
HDAC1-207ENST00000481281 HERV-K104P63124 156 aa7.82□□□□□ -1.16
HDAC1-207ENST00000481281 RPL24P83731 157 aaKnown RBP7.82□□□□□ -1.16
HDAC1-207ENST00000481281 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 DPM2O94777 84 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 NDUFA12Q9UI09 145 aa7.81□□□□□ -1.16
HDAC1-207ENST00000481281 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
HDAC1-207ENST00000481281 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
HDAC1-207ENST00000481281 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 LEPROTO15243 131 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 IGKCP01834 107 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 PLEKHB2Q96CS7 222 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 PMCHL2Q9BQD1 86 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
HDAC1-207ENST00000481281 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
HDAC1-207ENST00000481281 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
HDAC1-207ENST00000481281 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
HDAC1-207ENST00000481281 J3QQQ9 107 aa7.77□□□□□ -1.17
HDAC1-207ENST00000481281 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
HDAC1-207ENST00000481281 HERVK_113P61574 105 aa7.77□□□□□ -1.17
HDAC1-207ENST00000481281 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
HDAC1-207ENST00000481281 M0R378 163 aa7.76□□□□□ -1.17
HDAC1-207ENST00000481281 ATP6V1G1O75348 118 aa7.76□□□□□ -1.17
HDAC1-207ENST00000481281 UBE2AP49459 152 aa7.76□□□□□ -1.17
HDAC1-207ENST00000481281 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
HDAC1-207ENST00000481281 NMUP48645 174 aa7.75□□□□□ -1.17
HDAC1-207ENST00000481281 PRLHP81277 87 aa7.75□□□□□ -1.17
HDAC1-207ENST00000481281 COA6Q5JTJ3 125 aaKnown RBP7.75□□□□□ -1.17
HDAC1-207ENST00000481281 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
HDAC1-207ENST00000481281 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
HDAC1-207ENST00000481281 A0A087X002 238 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 E9PLD3 99 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
HDAC1-207ENST00000481281 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
HDAC1-207ENST00000481281 DAND5Q8N907 189 aa7.72□□□□□ -1.17
HDAC1-207ENST00000481281 NCR3O14931 201 aa7.71□□□□□ -1.18
HDAC1-207ENST00000481281 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
HDAC1-207ENST00000481281 PRYO14603 147 aa7.7□□□□□ -1.18
HDAC1-207ENST00000481281 CRYGAP11844 174 aa7.7□□□□□ -1.18
HDAC1-207ENST00000481281 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
HDAC1-207ENST00000481281 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
HDAC1-207ENST00000481281 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
HDAC1-207ENST00000481281 C3orf79P0CE67 100 aa7.69□□□□□ -1.18
HDAC1-207ENST00000481281 SPRR1AP35321 89 aa7.69□□□□□ -1.18
HDAC1-207ENST00000481281 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
HDAC1-207ENST00000481281 TRBV10-3A0A0K0K1G6 114 aa7.68□□□□□ -1.18
HDAC1-207ENST00000481281 TRBV10-2A0A0K0K1G8 114 aa7.68□□□□□ -1.18
HDAC1-207ENST00000481281 LRP2P98164 4655 aa7.68□□□□□ -1.18
HDAC1-207ENST00000481281 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
HDAC1-207ENST00000481281 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
HDAC1-207ENST00000481281 KRTAP4-16G5E9R7 235 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-207ENST00000481281 KRTAP13-2Q52LG2 175 aa7.67□□□□□ -1.18
HDAC1-207ENST00000481281 TYMSOSQ8TAI1 123 aa7.67□□□□□ -1.18
HDAC1-207ENST00000481281 MIEN1Q9BRT3 115 aa7.67□□□□□ -1.18
HDAC1-207ENST00000481281 NDUFC2O95298 119 aa7.66□□□□□ -1.18
HDAC1-207ENST00000481281 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
HDAC1-207ENST00000481281 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
HDAC1-207ENST00000481281 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
HDAC1-207ENST00000481281 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-207ENST00000481281 EIF4EBP3O60516 100 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-207ENST00000481281 KRTDAPP60985 99 aa7.65□□□□□ -1.18
HDAC1-207ENST00000481281 LITAFQ99732 161 aa7.65□□□□□ -1.18
HDAC1-207ENST00000481281 DDTP30046 118 aa7.64□□□□□ -1.19
HDAC1-207ENST00000481281 ETDCA0A1B0GVM5 59 aa7.63□□□□□ -1.19
HDAC1-207ENST00000481281 TIMM17BO60830 172 aa7.63□□□□□ -1.19
HDAC1-207ENST00000481281 S100A1P23297 94 aa7.63□□□□□ -1.19
HDAC1-207ENST00000481281 S100A12P80511 92 aa7.63□□□□□ -1.19
HDAC1-207ENST00000481281 SPRR4Q96PI1 79 aa7.63□□□□□ -1.19
HDAC1-207ENST00000481281 ZNF815PA8K554 130 aa7.62□□□□□ -1.19
HDAC1-207ENST00000481281 IGLV6-57P01721 117 aa7.62□□□□□ -1.19
HDAC1-207ENST00000481281 NPC2P61916 151 aa7.62□□□□□ -1.19
HDAC1-207ENST00000481281 C20orf202A1L168 122 aa7.61□□□□□ -1.19
HDAC1-207ENST00000481281 B5MCH6 92 aa7.61□□□□□ -1.19
HDAC1-207ENST00000481281 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
HDAC1-207ENST00000481281 TTTY13Q9BZ97 58 aa7.61□□□□□ -1.19
HDAC1-207ENST00000481281 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-207ENST00000481281 TSPAN13O95857 204 aa7.6□□□□□ -1.19
HDAC1-207ENST00000481281 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
HDAC1-207ENST00000481281 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
HDAC1-207ENST00000481281 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
HDAC1-207ENST00000481281 Q6ZRX8 168 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms