RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 ARPC5O15511 151 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 MT2AP02795 61 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 CXCL5P42830 114 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 MRPL51Q4U2R6 128 aaKnown RBP3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 ZC2HC1BQ5TFG8 222 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 TEX43Q6ZNM6 134 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 LINC01551Q86U37 167 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 TMEM141Q96I45 108 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
SPTLC1-205ENST00000477888 LINC00862A6NCI5 91 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 RAB5BP61020 215 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 MOBPQ13875 183 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 FAM104BQ5XKR9 115 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 AMELXQ99217 191 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 SMIM2Q9BVW6 85 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
SPTLC1-205ENST00000477888 HSBP1L1C9JCN9 74 aa3.82□□□□□ -1.8
SPTLC1-205ENST00000477888 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
SPTLC1-205ENST00000477888 C2orf88Q9BSF0 95 aa3.82□□□□□ -1.8
SPTLC1-205ENST00000477888 MT1FP04733 61 aa3.81□□□□□ -1.8
SPTLC1-205ENST00000477888 RPL37P61927 97 aaKnown RBP3.81□□□□□ -1.8
SPTLC1-205ENST00000477888 Q8NDZ9 215 aa3.81□□□□□ -1.8
SPTLC1-205ENST00000477888 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
SPTLC1-205ENST00000477888 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
SPTLC1-205ENST00000477888 IGLV6-57P01721 117 aa3.8□□□□□ -1.8
SPTLC1-205ENST00000477888 CKS2P33552 79 aa3.8□□□□□ -1.8
SPTLC1-205ENST00000477888 Q6Q795 121 aa3.8□□□□□ -1.8
SPTLC1-205ENST00000477888 NPYP01303 97 aa3.79□□□□□ -1.8
SPTLC1-205ENST00000477888 RAB5AP20339 215 aa3.79□□□□□ -1.8
SPTLC1-205ENST00000477888 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SPTLC1-205ENST00000477888 COX7B2Q8TF08 81 aa3.79□□□□□ -1.8
SPTLC1-205ENST00000477888 SND1-IT1Q9HBX3 110 aa3.79□□□□□ -1.8
SPTLC1-205ENST00000477888 IGIPA6NJ69 53 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 D6R8Y8 96 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 RAB14P61106 215 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 SEC11AP67812 179 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 ZNF345Q14585 488 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 PDZD11Q5EBL8 140 aa3.78□□□□□ -1.8
SPTLC1-205ENST00000477888 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
SPTLC1-205ENST00000477888 SPRR1AP35321 89 aa3.77□□□□□ -1.81
SPTLC1-205ENST00000477888 AKAP14Q86UN6 197 aa3.77□□□□□ -1.81
SPTLC1-205ENST00000477888 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
SPTLC1-205ENST00000477888 PFN2P35080 140 aa3.76□□□□□ -1.81
SPTLC1-205ENST00000477888 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
SPTLC1-205ENST00000477888 TMEM250H0YL14 139 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 SMLR1H3BR10 107 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 NAT8BQ9UHF3 227 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 CYSLTR1Q9Y271 337 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 V9GYV3 84 aa3.75□□□□□ -1.81
SPTLC1-205ENST00000477888 KANTRA0A1W2PQU2 76 aa3.74□□□□□ -1.81
SPTLC1-205ENST00000477888 PPBPP02775 128 aa3.74□□□□□ -1.81
SPTLC1-205ENST00000477888 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
SPTLC1-205ENST00000477888 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 A0A1B0GW15 77 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 HMSDA8MTL9 139 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 E9PLD3 99 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 NDUFV3P56181 108 aaKnown RBP3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 COX17Q14061 63 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
SPTLC1-205ENST00000477888 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
SPTLC1-205ENST00000477888 SPINK8P0C7L1 97 aa3.72□□□□□ -1.81
SPTLC1-205ENST00000477888 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
SPTLC1-205ENST00000477888 TMEM136Q6ZRR5 245 aa3.72□□□□□ -1.81
SPTLC1-205ENST00000477888 ORMDL3Q8N138 153 aa3.72□□□□□ -1.81
SPTLC1-205ENST00000477888 ETDCA0A1B0GVM5 59 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 C20orf202A1L168 122 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 F8W036 122 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 HSBP1O75506 76 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 PRELID3AQ96N28 172 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 Q9BRP9 147 aa3.71□□□□□ -1.82
SPTLC1-205ENST00000477888 A0A1B0GXF2 115 aa3.7□□□□□ -1.82
SPTLC1-205ENST00000477888 ORMDL2Q53FV1 153 aa3.7□□□□□ -1.82
SPTLC1-205ENST00000477888 ADAMTSL4-AS1Q5T5F5 129 aa3.7□□□□□ -1.82
SPTLC1-205ENST00000477888 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
SPTLC1-205ENST00000477888 Q8N8P6 123 aa3.7□□□□□ -1.82
SPTLC1-205ENST00000477888 IGKV2-30P06310 120 aa3.69□□□□□ -1.82
SPTLC1-205ENST00000477888 CEBPGP53567 150 aa3.69□□□□□ -1.82
SPTLC1-205ENST00000477888 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
SPTLC1-205ENST00000477888 SMIM7Q9BQ49 75 aa3.69□□□□□ -1.82
SPTLC1-205ENST00000477888 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
SPTLC1-205ENST00000477888 TRAV9-1A0A075B6T8 112 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 K7EMI3 77 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 S100A8P05109 93 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 VAMP3Q15836 100 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 C1orf195Q5TG92 126 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 MRPL54Q6P161 138 aaKnown RBP3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 MAP1LC3AQ9H492 121 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms