RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
HDAC6-221ENST00000477561 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
HDAC6-221ENST00000477561 C6orf226Q5I0X4 101 aa5.27□□□□□ -1.57
HDAC6-221ENST00000477561 ORAOV1Q8WV07 137 aa5.27□□□□□ -1.57
HDAC6-221ENST00000477561 FLG2Q5D862 2391 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-221ENST00000477561 A0A087WYN8 130 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 TIMM17BO60830 172 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-221ENST00000477561 CKS1BP61024 79 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 RPL37AP61513 92 aaKnown RBP5.26□□□□□ -1.57
HDAC6-221ENST00000477561 SRSF9Q13242 221 aaKnown RBP eCLIP5.26□□□□□ -1.57
HDAC6-221ENST00000477561 ZNF625Q96I27 306 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-221ENST00000477561 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
HDAC6-221ENST00000477561 SPANXB1Q9NS25 103 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-221ENST00000477561 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
HDAC6-221ENST00000477561 HINT1P49773 126 aaPredicted RBP5.25□□□□□ -1.57
HDAC6-221ENST00000477561 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 MEIG1Q5JSS6 88 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 Q6ZVH6 145 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 SPACA4Q8TDM5 124 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 COPS9Q8WXC6 57 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
HDAC6-221ENST00000477561 A0A096LNI7 61 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 F8WDY8 70 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 BATFQ16520 125 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
HDAC6-221ENST00000477561 BVES-AS1Q5T3Y7 98 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 CEND1Q8N111 149 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
HDAC6-221ENST00000477561 A6NDN8 102 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 IFITM1P13164 125 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 PTTG1IPP53801 180 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 Q6ZRU5 148 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 SNHG12Q9BXW3 62 aa5.23□□□□□ -1.57
HDAC6-221ENST00000477561 RPL24P83731 157 aaKnown RBP5.22□□□□□ -1.57
HDAC6-221ENST00000477561 GAGE2BQ13066 116 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 COL5A1-AS1Q5SY13 56 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 C2orf48Q96LS8 159 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 LITAFQ99732 161 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
HDAC6-221ENST00000477561 DMBT1Q9UGM3 2413 aaPredicted RBP5.22□□□□□ -1.57
HDAC6-221ENST00000477561 SMIM13P0DJ93 91 aa5.21□□□□□ -1.58
HDAC6-221ENST00000477561 LINC00158P58513 81 aa5.21□□□□□ -1.58
HDAC6-221ENST00000477561 COX17Q14061 63 aa5.21□□□□□ -1.58
HDAC6-221ENST00000477561 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
HDAC6-221ENST00000477561 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 LOC107984640A0A0U1RRK4 108 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
HDAC6-221ENST00000477561 FXYD2P54710 66 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 C7orf33Q8WU49 177 aa5.2□□□□□ -1.58
HDAC6-221ENST00000477561 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 PFN2P35080 140 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
HDAC6-221ENST00000477561 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 UNQ6190/PRO20217Q6UXQ8 127 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 LINC00474Q9P2X8 69 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 PKIGQ9Y2B9 76 aa5.19□□□□□ -1.58
HDAC6-221ENST00000477561 A0A1W2PNN7 141 aa5.18□□□□□ -1.58
HDAC6-221ENST00000477561 MIR7-3HGQ8N6C7 128 aa5.18□□□□□ -1.58
HDAC6-221ENST00000477561 NHP2Q9NX24 153 aaKnown RBP5.18□□□□□ -1.58
HDAC6-221ENST00000477561 A0A1B0GWB2 263 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 A4D1N5 150 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 NPC2P61916 151 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 DAND5Q8N907 189 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 C6orf48Q9UBA6 75 aa5.17□□□□□ -1.58
HDAC6-221ENST00000477561 A0A0B4J2C4 111 aa5.16□□□□□ -1.58
HDAC6-221ENST00000477561 OXTP01178 125 aa5.16□□□□□ -1.58
HDAC6-221ENST00000477561 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
HDAC6-221ENST00000477561 C9orf116Q5BN46 136 aaPredicted RBP5.16□□□□□ -1.58
HDAC6-221ENST00000477561 LOC107984156A0A0G2JMH3 177 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 GAGE2EQ4V326 116 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 Q6ZRP5 223 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 ARL17AQ8IVW1 177 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 SND1-IT1Q9HBX3 110 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.59
HDAC6-221ENST00000477561 FAM168BA1KXE4 195 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 NDUFC2-KCTD14E9PQ53 114 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 K7ERJ3 54 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 TAX1BP3O14907 124 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 TLX1NBP0CAT3 122 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 CFC1BP0CG36 223 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 CFC1P0CG37 223 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
HDAC6-221ENST00000477561 PHF5AQ7RTV0 110 aaKnown RBP5.14□□□□□ -1.59
HDAC6-221ENST00000477561 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms