RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GIG44P09565 113 aaPredicted RBP7.68□□□□□ -1.18
COL27A1-204ENST00000477421 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
COL27A1-204ENST00000477421 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
COL27A1-204ENST00000477421 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
COL27A1-204ENST00000477421 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
COL27A1-204ENST00000477421 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
COL27A1-204ENST00000477421 FAM218AQ96MZ4 157 aa7.66□□□□□ -1.18
COL27A1-204ENST00000477421 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
COL27A1-204ENST00000477421 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
COL27A1-204ENST00000477421 ENHOQ6UWT2 76 aa7.65□□□□□ -1.18
COL27A1-204ENST00000477421 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
COL27A1-204ENST00000477421 A0A096LNI7 61 aa7.65□□□□□ -1.19
COL27A1-204ENST00000477421 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
COL27A1-204ENST00000477421 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
COL27A1-204ENST00000477421 A0A087WVE0 104 aa7.64□□□□□ -1.19
COL27A1-204ENST00000477421 NREPQ16612 68 aa7.64□□□□□ -1.19
COL27A1-204ENST00000477421 HIGD2AQ9BW72 106 aa7.64□□□□□ -1.19
COL27A1-204ENST00000477421 NIPBLQ6KC79 2804 aaeCLIP7.64□□□□□ -1.19
COL27A1-204ENST00000477421 HIVEP1P15822 2718 aa7.64□□□□□ -1.19
COL27A1-204ENST00000477421 ATOX1O00244 68 aa7.63□□□□□ -1.19
COL27A1-204ENST00000477421 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
COL27A1-204ENST00000477421 LYPD5Q6UWN5 251 aa7.63□□□□□ -1.19
COL27A1-204ENST00000477421 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
COL27A1-204ENST00000477421 CSNK1G2-AS1Q8NCQ2 148 aa7.62□□□□□ -1.19
COL27A1-204ENST00000477421 C19orf73Q9NVV2 129 aa7.62□□□□□ -1.19
COL27A1-204ENST00000477421 CR1P17927 2039 aa7.62□□□□□ -1.19
COL27A1-204ENST00000477421 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL27A1-204ENST00000477421 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 SPATA3Q8NHX4 192 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 C3orf84H3BNL1 204 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 PLAC8L1A1L4L8 177 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
COL27A1-204ENST00000477421 Q8N814 137 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 UPK3BQ9BT76 320 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
COL27A1-204ENST00000477421 COX17Q14061 63 aa7.6□□□□□ -1.19
COL27A1-204ENST00000477421 CCKP06307 115 aa7.6□□□□□ -1.19
COL27A1-204ENST00000477421 C20orf197Q8N268 126 aa7.6□□□□□ -1.19
COL27A1-204ENST00000477421 KRTAP1-1Q07627 177 aa7.59□□□□□ -1.19
COL27A1-204ENST00000477421 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
COL27A1-204ENST00000477421 LINC00846Q9NV44 126 aa7.58□□□□□ -1.2
COL27A1-204ENST00000477421 Q6ZRU5 148 aa7.57□□□□□ -1.2
COL27A1-204ENST00000477421 FAM240AA0A1B0GVK7 77 aa7.57□□□□□ -1.2
COL27A1-204ENST00000477421 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
COL27A1-204ENST00000477421 BAHCC1Q9P281 2608 aa7.57□□□□□ -1.2
COL27A1-204ENST00000477421 M0R2N4 97 aa7.57□□□□□ -1.2
COL27A1-204ENST00000477421 M0R378 163 aa7.56□□□□□ -1.2
COL27A1-204ENST00000477421 Q8NAQ8 132 aa7.56□□□□□ -1.2
COL27A1-204ENST00000477421 ESRGQ1W209 222 aa7.56□□□□□ -1.2
COL27A1-204ENST00000477421 FAM104AQ969W3 186 aa7.55□□□□□ -1.2
COL27A1-204ENST00000477421 H3BS24 57 aa7.55□□□□□ -1.2
COL27A1-204ENST00000477421 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 UQCRQO14949 82 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 UBE2AP49459 152 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 KRTAP24-1Q3LI83 254 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 KLK5Q9Y337 293 aaPredicted RBP7.54□□□□□ -1.2
COL27A1-204ENST00000477421 SPENQ96T58 3664 aaKnown RBP7.54□□□□□ -1.2
COL27A1-204ENST00000477421 BPY2O14599 106 aa7.54□□□□□ -1.2
COL27A1-204ENST00000477421 PDE6GP18545 87 aa7.52□□□□□ -1.2
COL27A1-204ENST00000477421 C6orf48Q9UBA6 75 aa7.52□□□□□ -1.21
COL27A1-204ENST00000477421 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
COL27A1-204ENST00000477421 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
COL27A1-204ENST00000477421 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
COL27A1-204ENST00000477421 NDUFC2O95298 119 aa7.51□□□□□ -1.21
COL27A1-204ENST00000477421 LINC00575Q6W349 94 aa7.51□□□□□ -1.21
COL27A1-204ENST00000477421 J3QL48 77 aa7.5□□□□□ -1.21
COL27A1-204ENST00000477421 CDK2AP2O75956 126 aa7.5□□□□□ -1.21
COL27A1-204ENST00000477421 SNURFQ9Y675 71 aa7.5□□□□□ -1.21
COL27A1-204ENST00000477421 Q6Q795 121 aa7.49□□□□□ -1.21
COL27A1-204ENST00000477421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.48□□□□□ -1.21
COL27A1-204ENST00000477421 H3BQ85 93 aa7.47□□□□□ -1.21
COL27A1-204ENST00000477421 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
COL27A1-204ENST00000477421 COX7CP15954 63 aa7.47□□□□□ -1.21
COL27A1-204ENST00000477421 Q6JHZ5 121 aa7.47□□□□□ -1.21
COL27A1-204ENST00000477421 Q8N9L7 120 aa7.45□□□□□ -1.22
COL27A1-204ENST00000477421 NDUFS5O43920 106 aa7.45□□□□□ -1.22
COL27A1-204ENST00000477421 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
COL27A1-204ENST00000477421 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
COL27A1-204ENST00000477421 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
COL27A1-204ENST00000477421 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 KMT2BQ9UMN6 2715 aaPredicted RBP7.44□□□□□ -1.22
COL27A1-204ENST00000477421 KRTAP10-11P60412 298 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 MUC7Q8TAX7 377 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 A0A0A0MQY5 61 aa7.44□□□□□ -1.22
COL27A1-204ENST00000477421 H0Y9J4 135 aa7.43□□□□□ -1.22
COL27A1-204ENST00000477421 LOC107984640A0A0U1RRK4 108 aa7.43□□□□□ -1.22
COL27A1-204ENST00000477421 J3KT08 172 aa7.43□□□□□ -1.22
COL27A1-204ENST00000477421 Q6ZVQ6 151 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 TRBV7-7A0A0K0K1E9 115 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 LINC01556Q5JQF7 62 aa7.42□□□□□ -1.22
COL27A1-204ENST00000477421 PRLHP81277 87 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
COL27A1-204ENST00000477421 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms