RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TP53TG3Q9ULZ0 132 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 C22orf24Q9Y442 160 aa1.68□□□□□ -2.14
HMGN4-202ENST00000477243 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 IGKV2-28A0A075B6P5 120 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 TRBV10-1A0A0K0K1A3 114 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 IGLC7A0M8Q6 106 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 TMEM30CPA0ZSE6 113 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 NUPR1O60356 82 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 IGKV2D-28P01615 120 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 NMBP08949 121 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 FAUP35544 74 aaKnown RBP1.67□□□□□ -2.14
HMGN4-202ENST00000477243 C1orf137Q5JT78 98 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 CCL19Q99731 98 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 ST20Q9HBF5 79 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 PRR34Q9NV39 138 aa1.67□□□□□ -2.14
HMGN4-202ENST00000477243 ALPK2Q86TB3 2170 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 APOC3P02656 99 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 ALKAL2Q6UX46 152 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 ZNF818PQ6ZRF7 136 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 KRTAP11-1Q8IUC1 163 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 C9orf163Q8N9P6 203 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 SPTSSBQ8NFR3 76 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 PATE1Q8WXA2 126 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 CYTL1Q9NRR1 136 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 ANAPC11Q9NYG5 84 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 MED12Q93074 2177 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 DNAJC13O75165 2243 aa1.66□□□□□ -2.14
HMGN4-202ENST00000477243 DOCK11Q5JSL3 2073 aa1.65□□□□□ -2.14
HMGN4-202ENST00000477243 FAT1Q14517 4588 aa1.65□□□□□ -2.14
HMGN4-202ENST00000477243 CXorf51AA0A1B0GTR3 108 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 KANTRA0A1W2PQU2 76 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 HCG22E2RYF7 251 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 H3BRM9 83 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 SYS1-DBNDD2H3BUS1 97 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 PDCD5O14737 125 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 SIX6O95475 246 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 IGLV6-57P01721 117 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 P0C880 135 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 RNASE2P10153 161 aaKnown RBP1.65□□□□□ -2.15
HMGN4-202ENST00000477243 LYPD5Q6UWN5 251 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 FAM213BQ8TBF2 198 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 FAM167A-AS1Q96KT0 104 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 C20orf78Q9BR46 151 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 TIMM21Q9BVV7 248 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 SPCS1Q9Y6A9 102 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 LRP1Q07954 4544 aaKnown RBP1.65□□□□□ -2.15
HMGN4-202ENST00000477243 DOCK10Q96BY6 2186 aa1.65□□□□□ -2.15
HMGN4-202ENST00000477243 SPTBP11277 2137 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 TRAV12-3A0A0B4J271 114 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 A0A0D9SFI3 127 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 A0A0J9YY99 117 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 RTL8CO15255 209 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 SMIM11AP58511 58 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 CNBPP62633 177 aaKnown RBP1.64□□□□□ -2.15
HMGN4-202ENST00000477243 DEFA5Q01523 94 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 TDRG1Q3Y452 100 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 DEFB121Q5J5C9 76 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 CYP2G1PQ6ZSU1 146 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 S100ZQ8WXG8 99 aa1.64□□□□□ -2.15
HMGN4-202ENST00000477243 A0A1W2PPM0 123 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 BCE1O60756 84 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 MRPS14O60783 128 aaKnown RBP1.63□□□□□ -2.15
HMGN4-202ENST00000477243 COX6CP09669 75 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 SH2D6Q7Z4S9 175 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 LINC00167Q96N53 147 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 NXT2Q9NPJ8 142 aaKnown RBP1.63□□□□□ -2.15
HMGN4-202ENST00000477243 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 LINC00846Q9NV44 126 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 PRO1854Q9UHT4 67 aa1.63□□□□□ -2.15
HMGN4-202ENST00000477243 CR1P17927 2039 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 A0A096LNT2 108 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 IGKV2-24A0A0C4DH68 120 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 NUPR2A6NF83 97 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 ACYP1P07311 99 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 UBE2D1P51668 147 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 UBE2D3P61077 147 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 SNRPFP62306 86 aaKnown RBP1.62□□□□□ -2.15
HMGN4-202ENST00000477243 UBE2D2P62837 147 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 HMGN3Q15651 99 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 LIMD2Q9BT23 127 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 LINC00474Q9P2X8 69 aa1.62□□□□□ -2.15
HMGN4-202ENST00000477243 TRBV7-3A0A075B6L6 115 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 LOC285095A0A1B0GVY8 99 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 IGHV3-30P01768 117 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 IGLC2P0DOY2 106 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 IGLC3P0DOY3 106 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 IGHV3-30-5P0DP03 117 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 EDDM3BP56851 147 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 ELOF1P60002 83 aaKnown RBP1.61□□□□□ -2.15
HMGN4-202ENST00000477243 KLKP1Q107X0 134 aa1.61□□□□□ -2.15
HMGN4-202ENST00000477243 ETDBQ3ZM63 59 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms