RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 LGALS3P17931 250 aaKnown RBP9.04□□□□□ -0.96
CCNL1-217ENST00000476367 NMUP48645 174 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 Q8NDZ9 215 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 LITAFQ99732 161 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
CCNL1-217ENST00000476367 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
CCNL1-217ENST00000476367 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
CCNL1-217ENST00000476367 DDTP30046 118 aa9.03□□□□□ -0.96
CCNL1-217ENST00000476367 HERV-K104P63124 156 aa9.03□□□□□ -0.96
CCNL1-217ENST00000476367 COX17Q14061 63 aa9.03□□□□□ -0.96
CCNL1-217ENST00000476367 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
CCNL1-217ENST00000476367 A0A0U1RRA0 63 aa9.02□□□□□ -0.96
CCNL1-217ENST00000476367 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.96
CCNL1-217ENST00000476367 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.96
CCNL1-217ENST00000476367 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.96
CCNL1-217ENST00000476367 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.96
CCNL1-217ENST00000476367 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
CCNL1-217ENST00000476367 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
CCNL1-217ENST00000476367 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
CCNL1-217ENST00000476367 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
CCNL1-217ENST00000476367 VAMP8Q9BV40 100 aa9.01□□□□□ -0.97
CCNL1-217ENST00000476367 LCE2BO14633 110 aa9□□□□□ -0.97
CCNL1-217ENST00000476367 DAND5Q8N907 189 aa9□□□□□ -0.97
CCNL1-217ENST00000476367 LINC00158P58513 81 aa8.99□□□□□ -0.97
CCNL1-217ENST00000476367 CTAG1AP78358 180 aa8.99□□□□□ -0.97
CCNL1-217ENST00000476367 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
CCNL1-217ENST00000476367 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
CCNL1-217ENST00000476367 PAM16Q9Y3D7 125 aa8.98□□□□□ -0.97
CCNL1-217ENST00000476367 M0QXV9 152 aa8.98□□□□□ -0.97
CCNL1-217ENST00000476367 KRTAP10-4P60372 401 aaPredicted RBP8.98□□□□□ -0.97
CCNL1-217ENST00000476367 MEIG1Q5JSS6 88 aa8.98□□□□□ -0.97
CCNL1-217ENST00000476367 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
CCNL1-217ENST00000476367 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
CCNL1-217ENST00000476367 LOC107984156A0A0G2JMH3 177 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 HSBP1L1C9JCN9 74 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 SPATA45Q537H7 98 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 ARL17AQ8IVW1 177 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.98
CCNL1-217ENST00000476367 TIMM17BO60830 172 aa8.95□□□□□ -0.98
CCNL1-217ENST00000476367 COX8AP10176 69 aa8.95□□□□□ -0.98
CCNL1-217ENST00000476367 VPREB1P12018 145 aa8.95□□□□□ -0.98
CCNL1-217ENST00000476367 C14orf144Q96I85 54 aa8.95□□□□□ -0.98
CCNL1-217ENST00000476367 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
CCNL1-217ENST00000476367 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
CCNL1-217ENST00000476367 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
CCNL1-217ENST00000476367 IGLV5-37A0A075B6J1 123 aa8.93□□□□□ -0.98
CCNL1-217ENST00000476367 C22orf24Q9Y442 160 aa8.93□□□□□ -0.98
CCNL1-217ENST00000476367 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
CCNL1-217ENST00000476367 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
CCNL1-217ENST00000476367 DLEU1O43261 78 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 UBE2BP63146 152 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 LBHQ53QV2 105 aaPredicted RBP8.91□□□□□ -0.98
CCNL1-217ENST00000476367 NPC2P61916 151 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 UQCR10Q9UDW1 63 aa8.91□□□□□ -0.98
CCNL1-217ENST00000476367 C2orf91Q6ZV80 131 aa8.9□□□□□ -0.99
CCNL1-217ENST00000476367 LINC00308Q8TCZ7 52 aa8.9□□□□□ -0.99
CCNL1-217ENST00000476367 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.99
CCNL1-217ENST00000476367 MRPL55Q7Z7F7 128 aaKnown RBP8.89□□□□□ -0.99
CCNL1-217ENST00000476367 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
CCNL1-217ENST00000476367 GAGE10A6NGK3 116 aa8.88□□□□□ -0.99
CCNL1-217ENST00000476367 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
CCNL1-217ENST00000476367 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
CCNL1-217ENST00000476367 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
CCNL1-217ENST00000476367 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
CCNL1-217ENST00000476367 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
CCNL1-217ENST00000476367 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
CCNL1-217ENST00000476367 M0R143 59 aa8.86□□□□□ -0.99
CCNL1-217ENST00000476367 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
CCNL1-217ENST00000476367 SLC25A34Q6PIV7 304 aa8.86□□□□□ -0.99
CCNL1-217ENST00000476367 RPL37AP8A6NKH3 93 aa8.85□□□□□ -0.99
CCNL1-217ENST00000476367 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
CCNL1-217ENST00000476367 NCR3O14931 201 aa8.84□□□□□ -0.99
CCNL1-217ENST00000476367 NDUFC2O95298 119 aa8.84□□□□□ -0.99
CCNL1-217ENST00000476367 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
CCNL1-217ENST00000476367 SNHG12Q9BXW3 62 aa8.84□□□□□ -0.99
CCNL1-217ENST00000476367 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
CCNL1-217ENST00000476367 Q6ZVH6 145 aa8.83□□□□□ -1
CCNL1-217ENST00000476367 HIGD1BQ9P298 99 aa8.83□□□□□ -1
CCNL1-217ENST00000476367 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
CCNL1-217ENST00000476367 M0R378 163 aa8.82□□□□□ -1
CCNL1-217ENST00000476367 IFITM1P13164 125 aa8.82□□□□□ -1
CCNL1-217ENST00000476367 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
CCNL1-217ENST00000476367 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
CCNL1-217ENST00000476367 IGLV7-43P04211 117 aa8.8□□□□□ -1
CCNL1-217ENST00000476367 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
CCNL1-217ENST00000476367 TRBV10-3A0A0K0K1G6 114 aa8.8□□□□□ -1
CCNL1-217ENST00000476367 SRSF9Q13242 221 aaKnown RBP eCLIP8.8□□□□□ -1
CCNL1-217ENST00000476367 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
CCNL1-217ENST00000476367 IGLV6-57P01721 117 aa8.79□□□□□ -1
CCNL1-217ENST00000476367 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
CCNL1-217ENST00000476367 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
CCNL1-217ENST00000476367 A4D1N5 150 aa8.76□□□□□ -1.01
CCNL1-217ENST00000476367 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms