RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PINLYPA6NC86 204 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV2D-28P01615 120 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGLV1-51P01701 117 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV4-1P06312 121 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 C10orf55Q5SWW7 151 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 SMIM29Q86T20 159 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 KRTAP1-5Q9BYS1 174 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 DOPEY1Q5JWR5 2465 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 INTS1Q8N201 2190 aaKnown RBP4□□□□□ -1.77
ECHDC1-215ENST00000475319 MED13Q9UHV7 2174 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 TEX15Q9BXT5 2789 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4□□□□□ -1.77
ECHDC1-215ENST00000475319 MRPL33O75394 65 aaKnown RBP4□□□□□ -1.77
ECHDC1-215ENST00000475319 LINC00467Q9BRT7 94 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 PRRC2AP48634 2157 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 CNTRLQ7Z7A1 2325 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 CELSR3Q9NYQ7 3312 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 HIVEP3Q5T1R4 2406 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 A0A1B0GUV1 79 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 ETDCA0A1B0GVM5 59 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 SRRM5B3KS81 715 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 H3BPC8 53 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 USF3Q68DE3 2245 aa3.99□□□□□ -1.77
ECHDC1-215ENST00000475319 SVILO95425 2214 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3-21A0A0B4J1V1 117 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 B4DSR2 109 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 K7EIM0 57 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 M0QY20 66 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 NDUFA4O00483 81 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 TFF1P04155 84 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 PLAC8Q9NZF1 115 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 C2CD3Q4AC94 2353 aa3.98□□□□□ -1.77
ECHDC1-215ENST00000475319 TRGV2A0A075B6R0 118 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3-72A0A0B4J1Y9 119 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV1-3A0A0C4DH29 117 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 TRBV6-4A0A1B0GX49 114 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3-53P01767 116 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 RNASE3P12724 160 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 MUC7Q8TAX7 377 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 WFDC10AQ9H1F0 79 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 CENPEQ02224 2701 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 ZGRF1Q86YA3 2104 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 WDFY3Q8IZQ1 3526 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 ABCA12Q86UK0 2595 aa3.97□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3OR16-13A0A075B7E8 117 aa3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 CNBPP62633 177 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 COX7B2Q8TF08 81 aa3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 RNF5Q99942 180 aa3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 DSCAML1Q8TD84 2053 aa3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 FREM1Q5H8C1 2179 aa3.96□□□□□ -1.78
ECHDC1-215ENST00000475319 RTL8CO15255 209 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 IGHV1-8P0DP01 117 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 KRTAP21-3Q3LHN1 58 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 FAM104AQ969W3 186 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 IGLV4-60A0A075B6I1 120 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 ROMO1P60602 79 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 C1orf134Q5TEV5 83 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 ZFAND2AQ8N6M9 145 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 ARFGEF3Q5TH69 2177 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 POLQO75417 2590 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 BOD1L1Q8NFC6 3051 aa3.95□□□□□ -1.78
ECHDC1-215ENST00000475319 ITPR2Q14571 2701 aa3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 PRRC2CQ9Y520 2896 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 PKDREJQ9NTG1 2253 aa3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 COX7BP24311 80 aa3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 Q8NAQ8 132 aa3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 KCNQ1DNQ9H478 68 aa3.94□□□□□ -1.78
ECHDC1-215ENST00000475319 CCL18P55774 89 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 LINC00575Q6W349 94 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 LINC01006Q8NI28 216 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 GAFA1Q96PS6 74 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 F8P00451 2351 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 DOCK10Q96BY6 2186 aa3.93□□□□□ -1.78
ECHDC1-215ENST00000475319 IGHV3OR16-8A0A075B7F1 116 aa3.92□□□□□ -1.78
ECHDC1-215ENST00000475319 IGHV7-81A0A0B4J1V7 117 aa3.92□□□□□ -1.78
ECHDC1-215ENST00000475319 REG3AQ06141 175 aa3.92□□□□□ -1.78
ECHDC1-215ENST00000475319 PRR9Q5T870 116 aa3.92□□□□□ -1.78
ECHDC1-215ENST00000475319 CCDC168Q8NDH2 2452 aa3.92□□□□□ -1.78
ECHDC1-215ENST00000475319 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 LINC00158P58513 81 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 SPINK14Q6IE38 97 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 CHCHD7Q9BUK0 85 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 PCNX1Q96RV3 2341 aa3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 UTP20O75691 2785 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-215ENST00000475319 IGHV4-30-2A0A087WSY4 118 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 IGHV3-64DA0A0J9YX35 117 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 CLPSL1A2RUU4 121 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms