RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ATP6V1G1O75348 118 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 DPM2O94777 84 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 IGKV2D-28P01615 120 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BJP06899 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BOP23527 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BBP33778 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 RPL28P46779 137 aaKnown RBP14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BDP58876 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BCP62807 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST2H2BEQ16778 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BHQ93079 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BNQ99877 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HIST1H2BMQ99879 126 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 NDUFA12Q9UI09 145 aa14.48□□□□□ -0.09
CPNE1-223ENST00000475146 HERV-K104P63124 156 aa14.47□□□□□ -0.09
CPNE1-223ENST00000475146 MAP1LC3CQ9BXW4 147 aa14.47□□□□□ -0.09
CPNE1-223ENST00000475146 SMIM13P0DJ93 91 aa14.46□□□□□ -0.09
CPNE1-223ENST00000475146 HMCN2Q8NDA2 5059 aa14.46□□□□□ -0.09
CPNE1-223ENST00000475146 MYMXA0A1B0GTQ4 84 aa14.45□□□□□ -0.1
CPNE1-223ENST00000475146 KRTAP1-4P0C5Y4 121 aa14.45□□□□□ -0.1
CPNE1-223ENST00000475146 HERVK_113P61574 105 aa14.45□□□□□ -0.1
CPNE1-223ENST00000475146 Q8NDZ9 215 aa14.45□□□□□ -0.1
CPNE1-223ENST00000475146 IGKCP01834 107 aa14.44□□□□□ -0.1
CPNE1-223ENST00000475146 PLEKHB2Q96CS7 222 aa14.44□□□□□ -0.1
CPNE1-223ENST00000475146 IGLV1-50A0A075B6I6 118 aa14.43□□□□□ -0.1
CPNE1-223ENST00000475146 LEPROTO15243 131 aa14.43□□□□□ -0.1
CPNE1-223ENST00000475146 UBE2AP49459 152 aa14.43□□□□□ -0.1
CPNE1-223ENST00000475146 TSPEAR-AS2P59090 65 aa14.43□□□□□ -0.1
CPNE1-223ENST00000475146 LINC00587B1AMM8 73 aa14.41□□□□□ -0.1
CPNE1-223ENST00000475146 MIR7-3HGQ8N6C7 128 aa14.41□□□□□ -0.1
CPNE1-223ENST00000475146 J3QQQ9 107 aa14.39□□□□□ -0.11
CPNE1-223ENST00000475146 TMEM238C9JI98 176 aa14.38□□□□□ -0.11
CPNE1-223ENST00000475146 BOD1L2Q8IYS8 172 aa14.38□□□□□ -0.11
CPNE1-223ENST00000475146 LGALS3P17931 250 aaKnown RBP14.37□□□□□ -0.11
CPNE1-223ENST00000475146 TMEM126AQ9H061 195 aa14.37□□□□□ -0.11
CPNE1-223ENST00000475146 SYS1-DBNDD2H3BUS1 97 aa14.36□□□□□ -0.11
CPNE1-223ENST00000475146 RPL13AP40429 203 aaKnown RBP14.36□□□□□ -0.11
CPNE1-223ENST00000475146 FAM19A1Q7Z5A9 133 aa14.36□□□□□ -0.11
CPNE1-223ENST00000475146 M0R378 163 aa14.35□□□□□ -0.11
CPNE1-223ENST00000475146 PRLHP81277 87 aa14.35□□□□□ -0.11
CPNE1-223ENST00000475146 KRTAP13-1Q8IUC0 172 aa14.35□□□□□ -0.11
CPNE1-223ENST00000475146 NMUP48645 174 aa14.34□□□□□ -0.11
CPNE1-223ENST00000475146 NCR3O14931 201 aa14.33□□□□□ -0.12
CPNE1-223ENST00000475146 DAND5Q8N907 189 aa14.32□□□□□ -0.12
CPNE1-223ENST00000475146 E9PLD3 99 aa14.29□□□□□ -0.12
CPNE1-223ENST00000475146 LINC01545Q5VT33 79 aa14.29□□□□□ -0.12
CPNE1-223ENST00000475146 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
CPNE1-223ENST00000475146 COA6Q5JTJ3 125 aaKnown RBP14.28□□□□□ -0.12
CPNE1-223ENST00000475146 IGKV2D-26A0A0A0MRZ7 120 aa14.27□□□□□ -0.13
CPNE1-223ENST00000475146 MIEN1Q9BRT3 115 aa14.26□□□□□ -0.13
CPNE1-223ENST00000475146 A0A087X002 238 aa14.25□□□□□ -0.13
CPNE1-223ENST00000475146 C3orf79P0CE67 100 aa14.25□□□□□ -0.13
CPNE1-223ENST00000475146 CRYGAP11844 174 aa14.25□□□□□ -0.13
CPNE1-223ENST00000475146 ANAPC11Q9NYG5 84 aa14.25□□□□□ -0.13
CPNE1-223ENST00000475146 PRYO14603 147 aa14.24□□□□□ -0.13
CPNE1-223ENST00000475146 KRTDAPP60985 99 aa14.24□□□□□ -0.13
CPNE1-223ENST00000475146 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
CPNE1-223ENST00000475146 A0A0J9YXY3 114 aa14.22□□□□□ -0.13
CPNE1-223ENST00000475146 ARL17AQ8IVW1 177 aa14.22□□□□□ -0.13
CPNE1-223ENST00000475146 HIGD2AQ9BW72 106 aa14.22□□□□□ -0.13
CPNE1-223ENST00000475146 TRBV10-3A0A0K0K1G6 114 aa14.21□□□□□ -0.13
CPNE1-223ENST00000475146 TYMSOSQ8TAI1 123 aa14.21□□□□□ -0.13
CPNE1-223ENST00000475146 NPC2P61916 151 aa14.19□□□□□ -0.14
CPNE1-223ENST00000475146 S100A12P80511 92 aa14.19□□□□□ -0.14
CPNE1-223ENST00000475146 KCNQ1DNQ9H478 68 aa14.19□□□□□ -0.14
CPNE1-223ENST00000475146 S100A1P23297 94 aa14.18□□□□□ -0.14
CPNE1-223ENST00000475146 FAM229BQ4G0N7 80 aa14.18□□□□□ -0.14
CPNE1-223ENST00000475146 SPANXB1Q9NS25 103 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-223ENST00000475146 TRBV10-2A0A0K0K1G8 114 aa14.17□□□□□ -0.14
CPNE1-223ENST00000475146 ETDCA0A1B0GVM5 59 aa14.17□□□□□ -0.14
CPNE1-223ENST00000475146 ADAMTSL4-AS1Q5T5F5 129 aa14.17□□□□□ -0.14
CPNE1-223ENST00000475146 C20orf202A1L168 122 aa14.16□□□□□ -0.14
CPNE1-223ENST00000475146 DDTP30046 118 aa14.16□□□□□ -0.14
CPNE1-223ENST00000475146 SPRR1AP35321 89 aa14.16□□□□□ -0.14
CPNE1-223ENST00000475146 LINC00337Q8N6G1 96 aa14.16□□□□□ -0.14
CPNE1-223ENST00000475146 ZNF815PA8K554 130 aa14.15□□□□□ -0.14
CPNE1-223ENST00000475146 SOSTDC1Q6X4U4 206 aa14.15□□□□□ -0.14
CPNE1-223ENST00000475146 NDUFC2O95298 119 aa14.14□□□□□ -0.15
CPNE1-223ENST00000475146 KRTAP13-2Q52LG2 175 aa14.14□□□□□ -0.15
CPNE1-223ENST00000475146 S100A7L2Q5SY68 101 aa14.13□□□□□ -0.15
CPNE1-223ENST00000475146 TSPAN13O95857 204 aa14.12□□□□□ -0.15
CPNE1-223ENST00000475146 TTTY13Q9BZ97 58 aa14.12□□□□□ -0.15
CPNE1-223ENST00000475146 EIF4EBP3O60516 100 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-223ENST00000475146 KRTAP4-16G5E9R7 235 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-223ENST00000475146 TIMM17BO60830 172 aa14.1□□□□□ -0.15
CPNE1-223ENST00000475146 ZNF706Q9Y5V0 76 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-223ENST00000475146 SPRR4Q96PI1 79 aa14.09□□□□□ -0.15
CPNE1-223ENST00000475146 LITAFQ99732 161 aa14.09□□□□□ -0.15
CPNE1-223ENST00000475146 ATOH7Q8N100 152 aa14.08□□□□□ -0.16
CPNE1-223ENST00000475146 IGLV6-57P01721 117 aa14.07□□□□□ -0.16
CPNE1-223ENST00000475146 LINC00308Q8TCZ7 52 aa14.07□□□□□ -0.16
CPNE1-223ENST00000475146 SMCR5Q8TEV8 140 aa14.07□□□□□ -0.16
CPNE1-223ENST00000475146 LRP2P98164 4655 aa14.07□□□□□ -0.16
CPNE1-223ENST00000475146 UBR4Q5T4S7 5183 aa14.06□□□□□ -0.16
CPNE1-223ENST00000475146 B5MCH6 92 aa14.05□□□□□ -0.16
CPNE1-223ENST00000475146 PRR4Q16378 134 aa14.05□□□□□ -0.16
CPNE1-223ENST00000475146 ANKRD39Q53RE8 183 aa14.05□□□□□ -0.16
CPNE1-223ENST00000475146 TRAV23DV6A0A075B6W5 121 aa14.04□□□□□ -0.16
CPNE1-223ENST00000475146 S100A2P29034 98 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms