RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SMCO4Q9NRQ5 59 aa6.33□□□□□ -1.4
ACTB-209ENST00000473257 GNB1LQ9BYB4 327 aa6.32□□□□□ -1.4
ACTB-209ENST00000473257 NCR3O14931 201 aa6.31□□□□□ -1.4
ACTB-209ENST00000473257 LINC00158P58513 81 aa6.31□□□□□ -1.4
ACTB-209ENST00000473257 TMEM170BQ5T4T1 132 aa6.31□□□□□ -1.4
ACTB-209ENST00000473257 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
ACTB-209ENST00000473257 TMEM218A2RU14 115 aa6.29□□□□□ -1.4
ACTB-209ENST00000473257 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
ACTB-209ENST00000473257 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
ACTB-209ENST00000473257 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
ACTB-209ENST00000473257 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
ACTB-209ENST00000473257 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 S100PP25815 95 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 COX17Q14061 63 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
ACTB-209ENST00000473257 FP248Q71RG6 208 aaPredicted RBP6.28□□□□□ -1.4
ACTB-209ENST00000473257 ERC2-IT1O76042 136 aa6.27□□□□□ -1.41
ACTB-209ENST00000473257 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
ACTB-209ENST00000473257 CLLU1Q5K131 121 aa6.27□□□□□ -1.41
ACTB-209ENST00000473257 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
ACTB-209ENST00000473257 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
ACTB-209ENST00000473257 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
ACTB-209ENST00000473257 HBDP02042 147 aa6.26□□□□□ -1.41
ACTB-209ENST00000473257 MOBPQ13875 183 aa6.26□□□□□ -1.41
ACTB-209ENST00000473257 GAGE2AQ6NT46 116 aa6.26□□□□□ -1.41
ACTB-209ENST00000473257 LINC00614P0C842 121 aa6.25□□□□□ -1.41
ACTB-209ENST00000473257 CTAG1AP78358 180 aa6.25□□□□□ -1.41
ACTB-209ENST00000473257 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
ACTB-209ENST00000473257 ZNF706Q9Y5V0 76 aaPredicted RBP6.25□□□□□ -1.41
ACTB-209ENST00000473257 TRBV10-3A0A0K0K1G6 114 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 ETDCA0A1B0GVM5 59 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
ACTB-209ENST00000473257 PRYO14603 147 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
ACTB-209ENST00000473257 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
ACTB-209ENST00000473257 SPRR1AP35321 89 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 IFITM2Q01629 132 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 Q8N377 158 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 RPS10P5Q9NQ39 176 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 TRAPPC1Q9Y5R8 145 aa6.23□□□□□ -1.41
ACTB-209ENST00000473257 ATP6V1G1O75348 118 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 SPINK1P00995 79 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
ACTB-209ENST00000473257 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 UQCC3Q6UW78 93 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
ACTB-209ENST00000473257 B5MCH6 92 aa6.21□□□□□ -1.42
ACTB-209ENST00000473257 COX19Q49B96 90 aa6.21□□□□□ -1.42
ACTB-209ENST00000473257 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
ACTB-209ENST00000473257 COMMD7Q86VX2 200 aa6.2□□□□□ -1.42
ACTB-209ENST00000473257 Q9BRP9 147 aa6.2□□□□□ -1.42
ACTB-209ENST00000473257 XP32Q5T750 250 aa6.19□□□□□ -1.42
ACTB-209ENST00000473257 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
ACTB-209ENST00000473257 H0Y8G0 127 aa6.18□□□□□ -1.42
ACTB-209ENST00000473257 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
ACTB-209ENST00000473257 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
ACTB-209ENST00000473257 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
ACTB-209ENST00000473257 RHEBQ15382 184 aa6.17□□□□□ -1.42
ACTB-209ENST00000473257 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
ACTB-209ENST00000473257 ST20-AS1Q8NBB2 130 aa6.17□□□□□ -1.42
ACTB-209ENST00000473257 SLC25A20O43772 301 aa6.16□□□□□ -1.42
ACTB-209ENST00000473257 DDTP30046 118 aa6.16□□□□□ -1.42
ACTB-209ENST00000473257 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
ACTB-209ENST00000473257 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
ACTB-209ENST00000473257 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.42
ACTB-209ENST00000473257 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
ACTB-209ENST00000473257 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
ACTB-209ENST00000473257 NPC2P61916 151 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 HERV-K104P63124 156 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 MT1HP80294 61 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 Q6ZRX8 168 aa6.14□□□□□ -1.43
ACTB-209ENST00000473257 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
ACTB-209ENST00000473257 C9orf92A6NGG3 77 aa6.13□□□□□ -1.43
ACTB-209ENST00000473257 PMCHL2Q9BQD1 86 aa6.12□□□□□ -1.43
ACTB-209ENST00000473257 APOC3P02656 99 aa6.11□□□□□ -1.43
ACTB-209ENST00000473257 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
ACTB-209ENST00000473257 SOSTDC1Q6X4U4 206 aa6.11□□□□□ -1.43
ACTB-209ENST00000473257 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
ACTB-209ENST00000473257 IGLV8-61A0A075B6I0 122 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 LEPROTO15243 131 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 IGLV6-57P01721 117 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 S100A12P80511 92 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
ACTB-209ENST00000473257 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
ACTB-209ENST00000473257 SPANXB1Q9NS25 103 aaPredicted RBP6.1□□□□□ -1.43
ACTB-209ENST00000473257 TRAV23DV6A0A075B6W5 121 aa6.09□□□□□ -1.43
ACTB-209ENST00000473257 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
ACTB-209ENST00000473257 TRBV10-2A0A0K0K1G8 114 aa6.09□□□□□ -1.43
ACTB-209ENST00000473257 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
ACTB-209ENST00000473257 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms