RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 A0A096LNT2 108 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 TEX49A0A1B0GTD5 131 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 CCL22O00626 93 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 EDDM3BP56851 147 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 UBE2D3P61077 147 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 UBE2D2P62837 147 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 ELOBQ15370 118 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 ZNF818PQ6ZRF7 136 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 FAM223AQ8IWN6 122 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 CHKB-CPT1BH3BT56 60 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 VMO1Q7Z5L0 202 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 C9orf163Q8N9P6 203 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 BPESC1Q9GZL8 116 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 R4GN34 69 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 ROS1P08922 2347 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 VWFP04275 2813 aa3.6□□□□□ -1.83
RTF1-203ENST00000473214 TRAV23DV6A0A075B6W5 121 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 C2orf70A6NJV1 201 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 COX6CP09669 75 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 KLKP1Q107X0 134 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 NCBP2-AS2Q69YL0 99 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 NDUFA11Q86Y39 141 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 LYPD1Q8N2G4 141 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 TTTY12Q9BZ98 90 aa3.59□□□□□ -1.83
RTF1-203ENST00000473214 MUC4Q99102 2169 aa3.59□□□□□ -1.84
RTF1-203ENST00000473214 MED12Q93074 2177 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 H0YGG7 62 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 NDPQ00604 133 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 LIMD2Q9BT23 127 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 KIAA2026Q5HYC2 2103 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 PRR14LQ5THK1 2151 aa3.58□□□□□ -1.84
RTF1-203ENST00000473214 TRBV10-1A0A0K0K1A3 114 aa3.57□□□□□ -1.84
RTF1-203ENST00000473214 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
RTF1-203ENST00000473214 SDHAF1A6NFY7 115 aa3.57□□□□□ -1.84
RTF1-203ENST00000473214 FREM1Q5H8C1 2179 aa3.57□□□□□ -1.84
RTF1-203ENST00000473214 KRTAP26-1Q6PEX3 210 aa3.57□□□□□ -1.84
RTF1-203ENST00000473214 WNK1Q9H4A3 2382 aa3.56□□□□□ -1.84
RTF1-203ENST00000473214 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
RTF1-203ENST00000473214 UBE2D1P51668 147 aa3.56□□□□□ -1.84
RTF1-203ENST00000473214 Q5VV11 94 aa3.56□□□□□ -1.84
RTF1-203ENST00000473214 FREM3P0C091 2139 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 IGHV3-33P01772 117 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 Q9BRP9 147 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 GFRA4Q9GZZ7 299 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 PROK2Q9HC23 129 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 DYNLRB1Q9NP97 96 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
RTF1-203ENST00000473214 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 LOC285095A0A1B0GVY8 99 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 HMGN2P05204 90 aaKnown RBP3.54□□□□□ -1.84
RTF1-203ENST00000473214 PDE6HQ13956 83 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 C1orf137Q5JT78 98 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 C20orf197Q8N268 126 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 MRPL36Q9P0J6 103 aaKnown RBP3.54□□□□□ -1.84
RTF1-203ENST00000473214 HEATR5BQ9P2D3 2071 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
RTF1-203ENST00000473214 EXPH5Q8NEV8 1989 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 IQCF6A8MYZ5 107 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 PYDC2Q56P42 97 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 C6orf201Q7Z4U5 140 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 MED12LQ86YW9 2145 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 RYR2Q92736 4967 aa3.53□□□□□ -1.84
RTF1-203ENST00000473214 F8WEM9 126 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 GAS8-AS1O95177 125 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 CTSGP08311 255 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 CNBPP62633 177 aaKnown RBP3.52□□□□□ -1.85
RTF1-203ENST00000473214 Q6ZTI0 123 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 TVP23CQ96ET8 276 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
RTF1-203ENST00000473214 PRB2P02812 416 aaPredicted RBP3.51□□□□□ -1.85
RTF1-203ENST00000473214 LY6EQ16553 131 aa3.51□□□□□ -1.85
RTF1-203ENST00000473214 PSMG4Q5JS54 123 aa3.51□□□□□ -1.85
RTF1-203ENST00000473214 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
RTF1-203ENST00000473214 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
RTF1-203ENST00000473214 KIF25-AS1Q9Y6Z4 181 aa3.51□□□□□ -1.85
RTF1-203ENST00000473214 NINQ8N4C6 2090 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 TRAV40A0A0B4J280 105 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 A0A1B0GWA3 101 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 NUPR2A6NF83 97 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 A8MU10 97 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 DEFB121Q5J5C9 76 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 CDC42SE2Q9NRR3 84 aa3.5□□□□□ -1.85
RTF1-203ENST00000473214 FAM223BA6NKX1 122 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 FXYD1O00168 92 aa3.49□□□□□ -1.85
RTF1-203ENST00000473214 RTL8CO15255 209 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms