RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 K7EN84 100 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 UBE2L6O14933 153 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 LTAP01374 205 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 ARMS2P0C7Q2 107 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 HSD52Q0P140 79 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 ZNF56Q15929 161 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 ATOH7Q8N100 152 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 TMEM243Q9BU79 118 aa3.4□□□□□ -1.87
HDAC3-206ENST00000471968 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 BCE1O60756 84 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 COX8AP10176 69 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 CENPWQ5EE01 88 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 FAM231DQ6ZW35 169 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 FAM19A2Q8N3H0 131 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 OR10AG1Q8NH19 301 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 HSPB8Q9UJY1 196 aa3.39□□□□□ -1.87
HDAC3-206ENST00000471968 IGKV3D-20A0A0C4DH25 116 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 A0A1W2PPM0 123 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 H0Y8G0 127 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 MGPP08493 103 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 FABP2P12104 132 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 CKS1BP61024 79 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 LINC01545Q5VT33 79 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 RNASEKQ6P5S7 137 aaKnown RBP3.38□□□□□ -1.87
HDAC3-206ENST00000471968 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 MAP1LC3CQ9BXW4 147 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 SPCS1Q9Y6A9 102 aa3.38□□□□□ -1.87
HDAC3-206ENST00000471968 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 F8W1H4 67 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 LEPROTL1O95214 131 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 SPINK1P00995 79 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 KIAA1644Q3SXP7 199 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 CT83Q5H943 113 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 ERASQ7Z444 233 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 Q8N377 158 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 Q8NBF4 154 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
HDAC3-206ENST00000471968 H3BUT2 72 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 SPRR2DP22532 72 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 HBBP68871 147 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 TWIST1Q15672 202 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 COX8CQ7Z4L0 72 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 GEMIN7Q9H840 131 aaKnown RBP3.36□□□□□ -1.87
HDAC3-206ENST00000471968 SPANXA1Q9NS26 97 aa3.36□□□□□ -1.87
HDAC3-206ENST00000471968 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 A6NN06 94 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 MALP21145 153 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 CRIP1P50238 77 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 RPL24P83731 157 aaKnown RBP3.35□□□□□ -1.87
HDAC3-206ENST00000471968 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 RNASE7Q9H1E1 156 aaKnown RBP3.35□□□□□ -1.87
HDAC3-206ENST00000471968 VCX2Q9H322 139 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
HDAC3-206ENST00000471968 HIGD1BQ9P298 99 aa3.35□□□□□ -1.87
HDAC3-206ENST00000471968 A0A1B0GW15 77 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 A8MWL6 223 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 SMIM13P0DJ93 91 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 UBE2AP49459 152 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 GATD1Q8NB37 220 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 URB1-AS1Q96HZ7 61 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
HDAC3-206ENST00000471968 HIGD1CA8MV81 97 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 SNAI2O43623 268 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 SLC25A20O43772 301 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 ERG28Q9UKR5 140 aa3.33□□□□□ -1.88
HDAC3-206ENST00000471968 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 E9PLD3 99 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 RIGQ13278 110 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 TAL2Q16559 108 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
HDAC3-206ENST00000471968 C22orf24Q9Y442 160 aa3.32□□□□□ -1.88
HDAC3-206ENST00000471968 A0A1B0GUT8 65 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 H3BMG7 143 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 IGLC6P0CF74 106 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 FCER1GP30273 86 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 SPAG11BQ08648 103 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
HDAC3-206ENST00000471968 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 TMEM101Q96IK0 257 aa3.31□□□□□ -1.88
HDAC3-206ENST00000471968 COX7A2LO14548 114 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 PPP1R17O96001 155 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 SPINK8P0C7L1 97 aa3.3□□□□□ -1.88
HDAC3-206ENST00000471968 FOXA3P55318 350 aaPredicted RBP3.3□□□□□ -1.88
HDAC3-206ENST00000471968 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
HDAC3-206ENST00000471968 C10orf25Q5T742 122 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms