RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 SVBPQ8N300 66 aa-1.33□□□□□ -2.62
RBM39-228ENST00000471635 MRPL34Q9BQ48 92 aaKnown RBP-1.33□□□□□ -2.62
RBM39-228ENST00000471635 C7orf77A4D0Y5 90 aa-1.34□□□□□ -2.62
RBM39-228ENST00000471635 SNCAP37840 140 aa-1.34□□□□□ -2.62
RBM39-228ENST00000471635 LYSTQ99698 3801 aa-1.34□□□□□ -2.62
RBM39-228ENST00000471635 KIAA1551Q9HCM1 1747 aa-1.35□□□□□ -2.62
RBM39-228ENST00000471635 TRANK1O15050 2925 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 H0YGG7 62 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 DEFB107AQ8IZN7 70 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 RYR2Q92736 4967 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 CUBNO60494 3623 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 NCOA3Q9Y6Q9 1424 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 ANKRD36A6QL64 1941 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 LRRC37AA6NMS7 1700 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 DNAH2Q9P225 4427 aa-1.35□□□□□ -2.63
RBM39-228ENST00000471635 TARBP1Q13395 1621 aaKnown RBP-1.36□□□□□ -2.63
RBM39-228ENST00000471635 CC2D2AQ9P2K1 1620 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 A0A0G2JND7 137 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 H0Y9P7 68 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 H3BQ15 152 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 H3BQF6 201 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 GNG4P50150 75 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 KNDC1Q76NI1 1749 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 NRKQ7Z2Y5 1582 aa-1.36□□□□□ -2.63
RBM39-228ENST00000471635 CHD1O14646 1710 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 SPHKAPQ2M3C7 1700 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 PPP3R1P63098 170 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 DEFA5Q01523 94 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 RPL13AP3Q6NVV1 102 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 HEPN1Q6WQI6 88 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 CGREF1Q99674 301 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 PDE4DIPQ5VU43 2346 aa-1.37□□□□□ -2.63
RBM39-228ENST00000471635 RNF213Q63HN8 5207 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 MAPKBP1O60336 1514 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 hADV29S1A0JD25 119 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 TMEM262E9PQX1 116 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 CCL22O00626 93 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 ASIPP42127 132 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 VAMP8Q9BV40 100 aa-1.38□□□□□ -2.63
RBM39-228ENST00000471635 A0A1B0GV90 55 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 CORTO00230 105 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 DLEU1O43261 78 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 KRTDAPP60985 99 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 GNGT1P63211 74 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 WFDC13Q8IUB5 93 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 PZPP20742 1482 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 TOPAZ1Q8N9V7 1692 aa-1.39□□□□□ -2.63
RBM39-228ENST00000471635 TROQ12816 1431 aaPredicted RBP-1.4□□□□□ -2.63
RBM39-228ENST00000471635 LAMA3Q16787 3333 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 TRAV30A0A087WSZ9 112 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 ARMS2P0C7Q2 107 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 CDKN2A-AS1Q9UH64 79 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 ZZEF1O43149 2961 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 CUX1P39880 1505 aa-1.4□□□□□ -2.63
RBM39-228ENST00000471635 SHPRHQ149N8 1683 aa-1.41□□□□□ -2.63
RBM39-228ENST00000471635 H3BNG1 76 aa-1.41□□□□□ -2.64
RBM39-228ENST00000471635 ANKRD11Q6UB99 2663 aaPredicted RBP-1.41□□□□□ -2.64
RBM39-228ENST00000471635 NIPBLQ6KC79 2804 aaeCLIP-1.42□□□□□ -2.64
RBM39-228ENST00000471635 PLECQ15149 4684 aaKnown RBP-1.42□□□□□ -2.64
RBM39-228ENST00000471635 SPTY2D1-AS1A0A0U1RR47 76 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 MT1HP80294 61 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 PSMG4Q5JS54 123 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 HIGD1BQ9P298 99 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 CACFD1Q9UGQ2 172 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 CICQ96RK0 1608 aaPredicted RBP-1.42□□□□□ -2.64
RBM39-228ENST00000471635 DMXL1Q9Y485 3027 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 COL14A1Q05707 1796 aaKnown RBP-1.42□□□□□ -2.64
RBM39-228ENST00000471635 ABCC5O15440 1437 aa-1.42□□□□□ -2.64
RBM39-228ENST00000471635 TRBV25-1A0A075B6N4 114 aa-1.43□□□□□ -2.64
RBM39-228ENST00000471635 S100A1P23297 94 aa-1.43□□□□□ -2.64
RBM39-228ENST00000471635 CLIP1P30622 1438 aa-1.43□□□□□ -2.64
RBM39-228ENST00000471635 TRBV7-7A0A0K0K1E9 115 aa-1.44□□□□□ -2.64
RBM39-228ENST00000471635 VPS13BQ7Z7G8 4022 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 MON2Q7Z3U7 1717 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 ABCA3Q99758 1704 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 EIF4G3O43432 1585 aaKnown RBP-1.45□□□□□ -2.64
RBM39-228ENST00000471635 SAMD9Q5K651 1589 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 PMCHL1Q16048 86 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 ANK3Q12955 4377 aaKnown RBP-1.45□□□□□ -2.64
RBM39-228ENST00000471635 MGAM2Q2M2H8 2515 aa-1.45□□□□□ -2.64
RBM39-228ENST00000471635 APOBP04114 4563 aaKnown RBP-1.46□□□□□ -2.64
RBM39-228ENST00000471635 BCORQ6W2J9 1755 aa-1.46□□□□□ -2.64
RBM39-228ENST00000471635 C9orf92A6NGG3 77 aa-1.46□□□□□ -2.64
RBM39-228ENST00000471635 MLH3Q9UHC1 1453 aa-1.46□□□□□ -2.64
RBM39-228ENST00000471635 TEX15Q9BXT5 2789 aa-1.46□□□□□ -2.64
RBM39-228ENST00000471635 C5P01031 1676 aa-1.47□□□□□ -2.64
RBM39-228ENST00000471635 EFCAB10A6NFE3 127 aa-1.47□□□□□ -2.64
RBM39-228ENST00000471635 H7BZZ5 65 aa-1.47□□□□□ -2.64
RBM39-228ENST00000471635 DNAH11Q96DT5 4516 aa-1.47□□□□□ -2.64
RBM39-228ENST00000471635 ACACAQ13085 2346 aa-1.48□□□□□ -2.65
RBM39-228ENST00000471635 NDUFC1O43677 76 aa-1.48□□□□□ -2.65
RBM39-228ENST00000471635 TRGV9Q99603 122 aa-1.49□□□□□ -2.65
RBM39-228ENST00000471635 GNG8Q9UK08 70 aa-1.49□□□□□ -2.65
RBM39-228ENST00000471635 USP9XQ93008 2570 aaPredicted RBP-1.49□□□□□ -2.65
RBM39-228ENST00000471635 RGPD2P0DJD1 1756 aa-1.49□□□□□ -2.65
RBM39-228ENST00000471635 GNGT2O14610 69 aa-1.5□□□□□ -2.65
RBM39-228ENST00000471635 UQCRHP07919 91 aa-1.5□□□□□ -2.65
RBM39-228ENST00000471635 GTF2H5Q6ZYL4 71 aa-1.5□□□□□ -2.65
RBM39-228ENST00000471635 ANKRD50Q9ULJ7 1429 aa-1.5□□□□□ -2.65
RBM39-228ENST00000471635 WDR87Q6ZQQ6 2873 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms