RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 E9PLD3 99 aa12.17□□□□□ -0.46
HDAC7-220ENST00000471235 SMIM13P0DJ93 91 aa12.17□□□□□ -0.46
HDAC7-220ENST00000471235 LGALS3P17931 250 aaKnown RBP12.17□□□□□ -0.46
HDAC7-220ENST00000471235 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
HDAC7-220ENST00000471235 MRPL55Q7Z7F7 128 aaKnown RBP12.16□□□□□ -0.46
HDAC7-220ENST00000471235 C20orf202A1L168 122 aa12.15□□□□□ -0.46
HDAC7-220ENST00000471235 S100A6P06703 90 aa12.15□□□□□ -0.46
HDAC7-220ENST00000471235 NMUP48645 174 aa12.15□□□□□ -0.46
HDAC7-220ENST00000471235 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-220ENST00000471235 HIST1H2BLQ99880 126 aa12.15□□□□□ -0.46
HDAC7-220ENST00000471235 VPREB1P12018 145 aa12.14□□□□□ -0.47
HDAC7-220ENST00000471235 S100A2P29034 98 aa12.14□□□□□ -0.47
HDAC7-220ENST00000471235 NKAPP1Q8N9T2 125 aa12.14□□□□□ -0.47
HDAC7-220ENST00000471235 Q8NDZ9 215 aa12.14□□□□□ -0.47
HDAC7-220ENST00000471235 FAT3Q8TDW7 4589 aa12.14□□□□□ -0.47
HDAC7-220ENST00000471235 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
HDAC7-220ENST00000471235 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-220ENST00000471235 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
HDAC7-220ENST00000471235 LINC00167Q96N53 147 aa12.12□□□□□ -0.47
HDAC7-220ENST00000471235 LRP1Q07954 4544 aaKnown RBP12.12□□□□□ -0.47
HDAC7-220ENST00000471235 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDAC7-220ENST00000471235 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
HDAC7-220ENST00000471235 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
HDAC7-220ENST00000471235 IGLV7-43P04211 117 aa12.1□□□□□ -0.47
HDAC7-220ENST00000471235 SPINK6Q6UWN8 80 aa12.1□□□□□ -0.47
HDAC7-220ENST00000471235 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
HDAC7-220ENST00000471235 SNRPEP62304 92 aaKnown RBP12.09□□□□□ -0.47
HDAC7-220ENST00000471235 RPL24P83731 157 aaKnown RBP12.09□□□□□ -0.47
HDAC7-220ENST00000471235 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
HDAC7-220ENST00000471235 OXTP01178 125 aa12.08□□□□□ -0.48
HDAC7-220ENST00000471235 DMBT1Q9UGM3 2413 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-220ENST00000471235 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
HDAC7-220ENST00000471235 DAND5Q8N907 189 aa12.07□□□□□ -0.48
HDAC7-220ENST00000471235 C5orf52A6NGY3 159 aa12.06□□□□□ -0.48
HDAC7-220ENST00000471235 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
HDAC7-220ENST00000471235 J3QL48 77 aa12.05□□□□□ -0.48
HDAC7-220ENST00000471235 AKR1D1P51857 326 aa12.05□□□□□ -0.48
HDAC7-220ENST00000471235 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
HDAC7-220ENST00000471235 TTTY13Q9BZ97 58 aa12.05□□□□□ -0.48
HDAC7-220ENST00000471235 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
HDAC7-220ENST00000471235 ZNF815PA8K554 130 aa12.03□□□□□ -0.48
HDAC7-220ENST00000471235 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
HDAC7-220ENST00000471235 IGLV1-50A0A075B6I6 118 aa12.01□□□□□ -0.49
HDAC7-220ENST00000471235 LOC107984156A0A0G2JMH3 177 aa12.01□□□□□ -0.49
HDAC7-220ENST00000471235 NCR3O14931 201 aa12.01□□□□□ -0.49
HDAC7-220ENST00000471235 BCE1O60756 84 aa12.01□□□□□ -0.49
HDAC7-220ENST00000471235 ARL17AQ8IVW1 177 aa12.01□□□□□ -0.49
HDAC7-220ENST00000471235 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
HDAC7-220ENST00000471235 REG3GQ6UW15 175 aa12□□□□□ -0.49
HDAC7-220ENST00000471235 DIRC1Q969H9 104 aa12□□□□□ -0.49
HDAC7-220ENST00000471235 LITAFQ99732 161 aa12□□□□□ -0.49
HDAC7-220ENST00000471235 H0Y9J4 135 aa11.99□□□□□ -0.49
HDAC7-220ENST00000471235 M0R378 163 aa11.99□□□□□ -0.49
HDAC7-220ENST00000471235 TIMM17BO60830 172 aa11.98□□□□□ -0.49
HDAC7-220ENST00000471235 SOSTDC1Q6X4U4 206 aa11.98□□□□□ -0.49
HDAC7-220ENST00000471235 MIEN1Q9BRT3 115 aa11.98□□□□□ -0.49
HDAC7-220ENST00000471235 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
HDAC7-220ENST00000471235 ZNF861PO60384 105 aa11.97□□□□□ -0.49
HDAC7-220ENST00000471235 MT1HL1P0DM35 61 aa11.97□□□□□ -0.49
HDAC7-220ENST00000471235 NPC2P61916 151 aa11.97□□□□□ -0.49
HDAC7-220ENST00000471235 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-220ENST00000471235 LINC01600Q96MT4 127 aa11.96□□□□□ -0.49
HDAC7-220ENST00000471235 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
HDAC7-220ENST00000471235 PCP2Q8IVA1 136 aa11.95□□□□□ -0.5
HDAC7-220ENST00000471235 RPL28P46779 137 aaKnown RBP11.94□□□□□ -0.5
HDAC7-220ENST00000471235 KRTAP13-1Q8IUC0 172 aa11.94□□□□□ -0.5
HDAC7-220ENST00000471235 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-220ENST00000471235 NDUFC2O95298 119 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 UBE2AP49459 152 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 SCGB1D4Q6XE38 83 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 HERC1Q15751 4861 aa11.92□□□□□ -0.5
HDAC7-220ENST00000471235 TRBV10-3A0A0K0K1G6 114 aa11.91□□□□□ -0.5
HDAC7-220ENST00000471235 TRBV10-2A0A0K0K1G8 114 aa11.91□□□□□ -0.5
HDAC7-220ENST00000471235 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
HDAC7-220ENST00000471235 PRYO14603 147 aa11.91□□□□□ -0.5
HDAC7-220ENST00000471235 FAM19A1Q7Z5A9 133 aa11.9□□□□□ -0.5
HDAC7-220ENST00000471235 TNXBP22105 4242 aa11.89□□□□□ -0.51
HDAC7-220ENST00000471235 KRTAP1-4P0C5Y4 121 aa11.89□□□□□ -0.51
HDAC7-220ENST00000471235 PRLHP81277 87 aa11.89□□□□□ -0.51
HDAC7-220ENST00000471235 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
HDAC7-220ENST00000471235 SPANXCQ9NY87 97 aa11.89□□□□□ -0.51
HDAC7-220ENST00000471235 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
HDAC7-220ENST00000471235 DDTP30046 118 aa11.87□□□□□ -0.51
HDAC7-220ENST00000471235 TMA7Q9Y2S6 64 aaKnown RBP11.87□□□□□ -0.51
HDAC7-220ENST00000471235 SPRR1AP35321 89 aa11.86□□□□□ -0.51
HDAC7-220ENST00000471235 KRTAP10-8P60410 259 aa11.85□□□□□ -0.51
HDAC7-220ENST00000471235 IGLV6-57P01721 117 aa11.84□□□□□ -0.51
HDAC7-220ENST00000471235 S100A7L2Q5SY68 101 aa11.83□□□□□ -0.52
HDAC7-220ENST00000471235 LINC00337Q8N6G1 96 aa11.83□□□□□ -0.52
HDAC7-220ENST00000471235 KRTAP4-16G5E9R7 235 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-220ENST00000471235 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
HDAC7-220ENST00000471235 S100A12P80511 92 aa11.81□□□□□ -0.52
HDAC7-220ENST00000471235 Q6ZVH6 145 aa11.81□□□□□ -0.52
HDAC7-220ENST00000471235 ETDCA0A1B0GVM5 59 aa11.8□□□□□ -0.52
HDAC7-220ENST00000471235 IFITM1P13164 125 aa11.8□□□□□ -0.52
HDAC7-220ENST00000471235 JOSD1Q15040 202 aaPredicted RBP11.8□□□□□ -0.52
HDAC7-220ENST00000471235 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
HDAC7-220ENST00000471235 TRAV23DV6A0A075B6W5 121 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms