RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 LITAFQ99732 161 aa11.37□□□□□ -0.59
RPL39-202ENST00000468844 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
RPL39-202ENST00000468844 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
RPL39-202ENST00000468844 TSPAN13O95857 204 aa11.36□□□□□ -0.59
RPL39-202ENST00000468844 PFN2P35080 140 aa11.36□□□□□ -0.59
RPL39-202ENST00000468844 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
RPL39-202ENST00000468844 PRO0461Q9UI25 63 aa11.35□□□□□ -0.59
RPL39-202ENST00000468844 DAND5Q8N907 189 aa11.35□□□□□ -0.59
RPL39-202ENST00000468844 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
RPL39-202ENST00000468844 CFC1P0CG37 223 aa11.34□□□□□ -0.59
RPL39-202ENST00000468844 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
RPL39-202ENST00000468844 COX17Q14061 63 aa11.33□□□□□ -0.6
RPL39-202ENST00000468844 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
RPL39-202ENST00000468844 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
RPL39-202ENST00000468844 TIMM17BO60830 172 aa11.33□□□□□ -0.6
RPL39-202ENST00000468844 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
RPL39-202ENST00000468844 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPL39-202ENST00000468844 LINC00158P58513 81 aa11.32□□□□□ -0.6
RPL39-202ENST00000468844 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
RPL39-202ENST00000468844 LYRM7Q5U5X0 104 aa11.31□□□□□ -0.6
RPL39-202ENST00000468844 ARL17AQ8IVW1 177 aa11.31□□□□□ -0.6
RPL39-202ENST00000468844 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
RPL39-202ENST00000468844 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
RPL39-202ENST00000468844 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
RPL39-202ENST00000468844 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
RPL39-202ENST00000468844 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
RPL39-202ENST00000468844 LINC01620Q4KN68 170 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 Q6ZRP5 223 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 LRP1BQ9NZR2 4599 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 A4D1N5 150 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 TLX1NBP0CAT3 122 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 MTURNQ8N3F0 131 aa11.29□□□□□ -0.6
RPL39-202ENST00000468844 J3QR89 54 aa11.28□□□□□ -0.6
RPL39-202ENST00000468844 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
RPL39-202ENST00000468844 PSMB2P49721 201 aa11.28□□□□□ -0.6
RPL39-202ENST00000468844 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
RPL39-202ENST00000468844 NPC2P61916 151 aa11.28□□□□□ -0.6
RPL39-202ENST00000468844 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.6
RPL39-202ENST00000468844 DYNC1H1Q14204 4646 aaKnown RBP11.26□□□□□ -0.61
RPL39-202ENST00000468844 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
RPL39-202ENST00000468844 RPL18AQ02543 176 aaKnown RBP11.26□□□□□ -0.61
RPL39-202ENST00000468844 SOSTDC1Q6X4U4 206 aa11.26□□□□□ -0.61
RPL39-202ENST00000468844 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 A0A0B4J2C4 111 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
RPL39-202ENST00000468844 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 SND1-IT1Q9HBX3 110 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
RPL39-202ENST00000468844 TCL1BO95988 128 aa11.24□□□□□ -0.61
RPL39-202ENST00000468844 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
RPL39-202ENST00000468844 A0A096LNI7 61 aa11.22□□□□□ -0.61
RPL39-202ENST00000468844 SCGB1C2P0DMR2 95 aa11.21□□□□□ -0.61
RPL39-202ENST00000468844 IFITM1P13164 125 aa11.21□□□□□ -0.61
RPL39-202ENST00000468844 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
RPL39-202ENST00000468844 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.61
RPL39-202ENST00000468844 A0A1B0GVY2 172 aa11.2□□□□□ -0.62
RPL39-202ENST00000468844 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
RPL39-202ENST00000468844 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
RPL39-202ENST00000468844 Q8NDZ9 215 aa11.19□□□□□ -0.62
RPL39-202ENST00000468844 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
RPL39-202ENST00000468844 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
RPL39-202ENST00000468844 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
RPL39-202ENST00000468844 SIGMAR1Q99720 223 aa11.17□□□□□ -0.62
RPL39-202ENST00000468844 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
RPL39-202ENST00000468844 H7C2G1 150 aa11.16□□□□□ -0.62
RPL39-202ENST00000468844 PANO1I0J062 215 aa11.16□□□□□ -0.62
RPL39-202ENST00000468844 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
RPL39-202ENST00000468844 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
RPL39-202ENST00000468844 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
RPL39-202ENST00000468844 Q1RN00 199 aa11.15□□□□□ -0.62
RPL39-202ENST00000468844 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
RPL39-202ENST00000468844 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
RPL39-202ENST00000468844 PPDPFLQ8WWR9 84 aa11.13□□□□□ -0.63
RPL39-202ENST00000468844 M0QXV9 152 aa11.13□□□□□ -0.63
RPL39-202ENST00000468844 PRR3P79522 188 aaKnown RBP11.13□□□□□ -0.63
RPL39-202ENST00000468844 SERTAD4-AS1Q5TG53 156 aa11.13□□□□□ -0.63
RPL39-202ENST00000468844 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 NDUFC2O95298 119 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 VPREB1P12018 145 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
RPL39-202ENST00000468844 SLC25A20O43772 301 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 C9JAW5 83 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 TRIAP1O43715 76 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
RPL39-202ENST00000468844 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
RPL39-202ENST00000468844 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
RPL39-202ENST00000468844 ANKRD29Q8N6D5 301 aa11.09□□□□□ -0.63
RPL39-202ENST00000468844 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
RPL39-202ENST00000468844 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms