RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
HDAC3-203ENST00000467533 VCX2Q9H322 139 aa5.44□□□□□ -1.54
HDAC3-203ENST00000467533 RPS10P5Q9NQ39 176 aa5.44□□□□□ -1.54
HDAC3-203ENST00000467533 V9GYV3 84 aa5.44□□□□□ -1.54
HDAC3-203ENST00000467533 SEC11AP67812 179 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 AMELXQ99217 191 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 TIMM17AQ99595 171 aa5.43□□□□□ -1.54
HDAC3-203ENST00000467533 SMIM27A0A1W2PRY6 76 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 PFN2P35080 140 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 C2orf66Q6UXQ4 117 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
HDAC3-203ENST00000467533 LCE2BO14633 110 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 IGLV6-57P01721 117 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 NPSP0C0P6 89 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 NAT8BQ9UHF3 227 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 CYSLTR1Q9Y271 337 aa5.41□□□□□ -1.54
HDAC3-203ENST00000467533 TRAV9-1A0A075B6T8 112 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 TMEM238LA0A1B0GVL6 79 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 ATP5LO75964 103 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 S100PP25815 95 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 PDZD11Q5EBL8 140 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 SND1-IT1Q9HBX3 110 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 SMCO4Q9NRQ5 59 aa5.4□□□□□ -1.54
HDAC3-203ENST00000467533 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
HDAC3-203ENST00000467533 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
HDAC3-203ENST00000467533 Q8NDZ9 215 aa5.39□□□□□ -1.55
HDAC3-203ENST00000467533 A0A1B0GW15 77 aa5.38□□□□□ -1.55
HDAC3-203ENST00000467533 RPL37P61927 97 aaKnown RBP5.38□□□□□ -1.55
HDAC3-203ENST00000467533 ATP5L2Q7Z4Y8 100 aa5.38□□□□□ -1.55
HDAC3-203ENST00000467533 PRYO14603 147 aa5.37□□□□□ -1.55
HDAC3-203ENST00000467533 PPBPP02775 128 aa5.37□□□□□ -1.55
HDAC3-203ENST00000467533 SPINK8P0C7L1 97 aa5.37□□□□□ -1.55
HDAC3-203ENST00000467533 YPEL4Q96NS1 127 aa5.37□□□□□ -1.55
HDAC3-203ENST00000467533 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
HDAC3-203ENST00000467533 ETDCA0A1B0GVM5 59 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 A0A1B0GXF2 115 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 S100A8P05109 93 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 COX19Q49B96 90 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 PAPPA-AS1Q5QFB9 102 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 ORMDL3Q8N138 153 aa5.36□□□□□ -1.55
HDAC3-203ENST00000467533 IGIPA6NJ69 53 aa5.35□□□□□ -1.55
HDAC3-203ENST00000467533 MRPL54Q6P161 138 aaKnown RBP5.35□□□□□ -1.55
HDAC3-203ENST00000467533 PRELID3AQ96N28 172 aa5.35□□□□□ -1.55
HDAC3-203ENST00000467533 ERG28Q9UKR5 140 aa5.35□□□□□ -1.55
HDAC3-203ENST00000467533 A6NJY4 79 aa5.34□□□□□ -1.55
HDAC3-203ENST00000467533 COLCA2A8K830 154 aa5.34□□□□□ -1.55
HDAC3-203ENST00000467533 MT2AP02795 61 aa5.34□□□□□ -1.55
HDAC3-203ENST00000467533 TMEM136Q6ZRR5 245 aa5.34□□□□□ -1.55
HDAC3-203ENST00000467533 MAP1LC3AQ9H492 121 aa5.34□□□□□ -1.55
HDAC3-203ENST00000467533 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
HDAC3-203ENST00000467533 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
HDAC3-203ENST00000467533 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
HDAC3-203ENST00000467533 SPRR1AP35321 89 aa5.32□□□□□ -1.56
HDAC3-203ENST00000467533 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
HDAC3-203ENST00000467533 HRCT1Q6UXD1 115 aa5.32□□□□□ -1.56
HDAC3-203ENST00000467533 ERC2-IT1O76042 136 aa5.31□□□□□ -1.56
HDAC3-203ENST00000467533 COX17Q14061 63 aa5.31□□□□□ -1.56
HDAC3-203ENST00000467533 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
HDAC3-203ENST00000467533 Q8N8P6 123 aa5.31□□□□□ -1.56
HDAC3-203ENST00000467533 ZNF625Q96I27 306 aaPredicted RBP5.31□□□□□ -1.56
HDAC3-203ENST00000467533 MT1FP04733 61 aa5.3□□□□□ -1.56
HDAC3-203ENST00000467533 TRAPPC1Q9Y5R8 145 aa5.3□□□□□ -1.56
HDAC3-203ENST00000467533 PRSS47A8MTI9 375 aa5.29□□□□□ -1.56
HDAC3-203ENST00000467533 NCR3O14931 201 aa5.29□□□□□ -1.56
HDAC3-203ENST00000467533 FABP9Q0Z7S8 132 aa5.29□□□□□ -1.56
HDAC3-203ENST00000467533 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
HDAC3-203ENST00000467533 MRPL18Q9H0U6 180 aaKnown RBP5.29□□□□□ -1.56
HDAC3-203ENST00000467533 KCNQ1DNQ9H478 68 aa5.29□□□□□ -1.56
HDAC3-203ENST00000467533 H3BRM9 83 aa5.28□□□□□ -1.56
HDAC3-203ENST00000467533 TRGC2P03986 189 aa5.28□□□□□ -1.56
HDAC3-203ENST00000467533 LAMTOR2Q9Y2Q5 125 aa5.28□□□□□ -1.56
HDAC3-203ENST00000467533 B5MCH6 92 aa5.27□□□□□ -1.57
HDAC3-203ENST00000467533 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
HDAC3-203ENST00000467533 S100A12P80511 92 aa5.27□□□□□ -1.57
HDAC3-203ENST00000467533 NEBP20929 6669 aa5.27□□□□□ -1.57
HDAC3-203ENST00000467533 C20orf202A1L168 122 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 K7EMI3 77 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 G0S2P27469 103 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 KIAA1644Q3SXP7 199 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 TOMM6Q96B49 74 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 SCGB3A1Q96QR1 104 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 Q9BRP9 147 aa5.26□□□□□ -1.57
HDAC3-203ENST00000467533 TRBV10-3A0A0K0K1G6 114 aa5.25□□□□□ -1.57
HDAC3-203ENST00000467533 LINC00158P58513 81 aa5.25□□□□□ -1.57
HDAC3-203ENST00000467533 IGLV5-39A0A0G2JS06 123 aa5.24□□□□□ -1.57
HDAC3-203ENST00000467533 A0A0U1RRA0 63 aa5.24□□□□□ -1.57
HDAC3-203ENST00000467533 ERASQ7Z444 233 aa5.24□□□□□ -1.57
HDAC3-203ENST00000467533 BOD1L2Q8IYS8 172 aa5.24□□□□□ -1.57
HDAC3-203ENST00000467533 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BKO60814 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BJP06899 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BOP23527 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BBP33778 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BDP58876 126 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms