RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SNAPC5O75971 98 aa-2.26□□□□□ -2.77
SMC4-207ENST00000467263 PTPN23Q9H3S7 1636 aa-2.27□□□□□ -2.77
SMC4-207ENST00000467263 LELP1Q5T871 98 aa-2.27□□□□□ -2.77
SMC4-207ENST00000467263 HEPN1Q6WQI6 88 aa-2.27□□□□□ -2.77
SMC4-207ENST00000467263 MRPL34Q9BQ48 92 aaKnown RBP-2.27□□□□□ -2.77
SMC4-207ENST00000467263 FAM107BQ9H098 131 aa-2.27□□□□□ -2.77
SMC4-207ENST00000467263 EDC4Q6P2E9 1401 aaKnown RBP-2.28□□□□□ -2.77
SMC4-207ENST00000467263 COL4A6Q14031 1691 aa-2.28□□□□□ -2.77
SMC4-207ENST00000467263 CRYM-AS1A6NIL9 109 aa-2.29□□□□□ -2.78
SMC4-207ENST00000467263 KALRNO60229 2985 aa-2.3□□□□□ -2.78
SMC4-207ENST00000467263 ACACAQ13085 2346 aa-2.3□□□□□ -2.78
SMC4-207ENST00000467263 HSD52Q0P140 79 aa-2.3□□□□□ -2.78
SMC4-207ENST00000467263 WDR87Q6ZQQ6 2873 aa-2.3□□□□□ -2.78
SMC4-207ENST00000467263 ROCK2O75116 1388 aaKnown RBP-2.31□□□□□ -2.78
SMC4-207ENST00000467263 MT1AP04731 61 aa-2.31□□□□□ -2.78
SMC4-207ENST00000467263 TRAV30A0A087WSZ9 112 aa-2.32□□□□□ -2.78
SMC4-207ENST00000467263 C7orf77A4D0Y5 90 aa-2.32□□□□□ -2.78
SMC4-207ENST00000467263 DEFB107AQ8IZN7 70 aa-2.32□□□□□ -2.78
SMC4-207ENST00000467263 C1orf54Q8WWF1 131 aa-2.32□□□□□ -2.78
SMC4-207ENST00000467263 MYOM2P54296 1465 aa-2.33□□□□□ -2.78
SMC4-207ENST00000467263 COL14A1Q05707 1796 aaKnown RBP-2.33□□□□□ -2.78
SMC4-207ENST00000467263 LRRC37AA6NMS7 1700 aa-2.33□□□□□ -2.78
SMC4-207ENST00000467263 KNDC1Q76NI1 1749 aa-2.33□□□□□ -2.78
SMC4-207ENST00000467263 SVBPQ8N300 66 aa-2.33□□□□□ -2.78
SMC4-207ENST00000467263 KIAA1551Q9HCM1 1747 aa-2.34□□□□□ -2.78
SMC4-207ENST00000467263 CELSR3Q9NYQ7 3312 aa-2.34□□□□□ -2.78
SMC4-207ENST00000467263 A0A0G2JND7 137 aa-2.34□□□□□ -2.78
SMC4-207ENST00000467263 H3BQF6 201 aa-2.34□□□□□ -2.78
SMC4-207ENST00000467263 CCL22O00626 93 aa-2.34□□□□□ -2.78
SMC4-207ENST00000467263 ANKRD11Q6UB99 2663 aaPredicted RBP-2.34□□□□□ -2.78
SMC4-207ENST00000467263 PDE4DIPQ5VU43 2346 aa-2.35□□□□□ -2.79
SMC4-207ENST00000467263 TEX15Q9BXT5 2789 aa-2.35□□□□□ -2.79
SMC4-207ENST00000467263 WFDC13Q8IUB5 93 aa-2.35□□□□□ -2.79
SMC4-207ENST00000467263 VAMP8Q9BV40 100 aa-2.35□□□□□ -2.79
SMC4-207ENST00000467263 CDKN2A-AS1Q9UH64 79 aa-2.35□□□□□ -2.79
SMC4-207ENST00000467263 ABCA13Q86UQ4 5058 aa-2.36□□□□□ -2.79
SMC4-207ENST00000467263 H0Y9P7 68 aa-2.36□□□□□ -2.79
SMC4-207ENST00000467263 GNGT1P63211 74 aa-2.36□□□□□ -2.79
SMC4-207ENST00000467263 DEFA5Q01523 94 aa-2.36□□□□□ -2.79
SMC4-207ENST00000467263 TROQ12816 1431 aaPredicted RBP-2.36□□□□□ -2.79
SMC4-207ENST00000467263 NCOA3Q9Y6Q9 1424 aa-2.36□□□□□ -2.79
SMC4-207ENST00000467263 RIF1Q5UIP0 2472 aaKnown RBP-2.36□□□□□ -2.79
SMC4-207ENST00000467263 TARBP1Q13395 1621 aaKnown RBP-2.37□□□□□ -2.79
SMC4-207ENST00000467263 IER3IP1Q9Y5U9 82 aa-2.37□□□□□ -2.79
SMC4-207ENST00000467263 VPS13BQ7Z7G8 4022 aa-2.38□□□□□ -2.79
SMC4-207ENST00000467263 NALCNQ8IZF0 1738 aa-2.38□□□□□ -2.79
SMC4-207ENST00000467263 CGREF1Q99674 301 aa-2.38□□□□□ -2.79
SMC4-207ENST00000467263 ARHGAP5Q13017 1502 aa-2.38□□□□□ -2.79
SMC4-207ENST00000467263 ANK3Q12955 4377 aaKnown RBP-2.39□□□□□ -2.79
SMC4-207ENST00000467263 TMEM262E9PQX1 116 aa-2.39□□□□□ -2.79
SMC4-207ENST00000467263 S100A12P80511 92 aa-2.39□□□□□ -2.79
SMC4-207ENST00000467263 COL12A1Q99715 3063 aa-2.39□□□□□ -2.79
SMC4-207ENST00000467263 ARMS2P0C7Q2 107 aa-2.4□□□□□ -2.79
SMC4-207ENST00000467263 ASIPP42127 132 aa-2.4□□□□□ -2.79
SMC4-207ENST00000467263 HIGD1BQ9P298 99 aa-2.4□□□□□ -2.79
SMC4-207ENST00000467263 SPTY2D1-AS1A0A0U1RR47 76 aa-2.41□□□□□ -2.8
SMC4-207ENST00000467263 KRTDAPP60985 99 aa-2.41□□□□□ -2.8
SMC4-207ENST00000467263 CICQ96RK0 1608 aaPredicted RBP-2.42□□□□□ -2.8
SMC4-207ENST00000467263 CC2D2AQ9P2K1 1620 aa-2.42□□□□□ -2.8
SMC4-207ENST00000467263 CHD1O14646 1710 aa-2.42□□□□□ -2.8
SMC4-207ENST00000467263 CLIP1P30622 1438 aa-2.42□□□□□ -2.8
SMC4-207ENST00000467263 NRKQ7Z2Y5 1582 aa-2.43□□□□□ -2.8
SMC4-207ENST00000467263 H3BNG1 76 aa-2.43□□□□□ -2.8
SMC4-207ENST00000467263 PPP3R1P63098 170 aa-2.43□□□□□ -2.8
SMC4-207ENST00000467263 H3BQ15 152 aa-2.44□□□□□ -2.8
SMC4-207ENST00000467263 GNG4P50150 75 aa-2.44□□□□□ -2.8
SMC4-207ENST00000467263 CUX1P39880 1505 aa-2.44□□□□□ -2.8
SMC4-207ENST00000467263 BCORQ6W2J9 1755 aa-2.44□□□□□ -2.8
SMC4-207ENST00000467263 SHPRHQ149N8 1683 aa-2.44□□□□□ -2.8
SMC4-207ENST00000467263 TRBV7-7A0A0K0K1E9 115 aa-2.45□□□□□ -2.8
SMC4-207ENST00000467263 hADV29S1A0JD25 119 aa-2.45□□□□□ -2.8
SMC4-207ENST00000467263 HMGN1P05114 100 aa-2.45□□□□□ -2.8
SMC4-207ENST00000467263 SPHKAPQ2M3C7 1700 aa-2.45□□□□□ -2.8
SMC4-207ENST00000467263 PKD1L2Q7Z442 2459 aa-2.46□□□□□ -2.8
SMC4-207ENST00000467263 MGAM2Q2M2H8 2515 aa-2.46□□□□□ -2.8
SMC4-207ENST00000467263 MT1HP80294 61 aa-2.46□□□□□ -2.8
SMC4-207ENST00000467263 PSMG4Q5JS54 123 aa-2.46□□□□□ -2.8
SMC4-207ENST00000467263 MON2Q7Z3U7 1717 aa-2.46□□□□□ -2.8
SMC4-207ENST00000467263 CACFD1Q9UGQ2 172 aa-2.47□□□□□ -2.8
SMC4-207ENST00000467263 MAPKBP1O60336 1514 aa-2.47□□□□□ -2.81
SMC4-207ENST00000467263 RGPD2P0DJD1 1756 aa-2.48□□□□□ -2.81
SMC4-207ENST00000467263 LRRK2Q5S007 2527 aa-2.48□□□□□ -2.81
SMC4-207ENST00000467263 RPL13AP3Q6NVV1 102 aa-2.48□□□□□ -2.81
SMC4-207ENST00000467263 TOPAZ1Q8N9V7 1692 aa-2.49□□□□□ -2.81
SMC4-207ENST00000467263 GCN1Q92616 2671 aaKnown RBP-2.49□□□□□ -2.81
SMC4-207ENST00000467263 KIF20BQ96Q89 1820 aa-2.49□□□□□ -2.81
SMC4-207ENST00000467263 CCDC168Q8NDH2 2452 aa-2.5□□□□□ -2.81
SMC4-207ENST00000467263 TRBV25-1A0A075B6N4 114 aa-2.51□□□□□ -2.81
SMC4-207ENST00000467263 CORTO00230 105 aa-2.51□□□□□ -2.81
SMC4-207ENST00000467263 S100A1P23297 94 aa-2.51□□□□□ -2.81
SMC4-207ENST00000467263 PMCHL1Q16048 86 aa-2.51□□□□□ -2.81
SMC4-207ENST00000467263 NBEAQ8NFP9 2946 aa-2.51□□□□□ -2.81
SMC4-207ENST00000467263 C5P01031 1676 aa-2.52□□□□□ -2.81
SMC4-207ENST00000467263 MTORP42345 2549 aa-2.52□□□□□ -2.81
SMC4-207ENST00000467263 DLEU1O43261 78 aa-2.53□□□□□ -2.81
SMC4-207ENST00000467263 PZPP20742 1482 aa-2.53□□□□□ -2.81
SMC4-207ENST00000467263 ABCA3Q99758 1704 aa-2.54□□□□□ -2.82
SMC4-207ENST00000467263 A0A1B0GV90 55 aa-2.54□□□□□ -2.82
SMC4-207ENST00000467263 PSENENQ9NZ42 101 aa-2.54□□□□□ -2.82
SMC4-207ENST00000467263 DNAH11Q96DT5 4516 aa-2.54□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms