RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
HDAC6-214ENST00000465269 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
HDAC6-214ENST00000465269 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 SYS1-DBNDD2H3BUS1 97 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 KRTDAPP60985 99 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
HDAC6-214ENST00000465269 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
HDAC6-214ENST00000465269 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-214ENST00000465269 C3orf79P0CE67 100 aa8.59□□□□□ -1.03
HDAC6-214ENST00000465269 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-214ENST00000465269 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
HDAC6-214ENST00000465269 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
HDAC6-214ENST00000465269 TOMM7Q9P0U1 55 aa8.59□□□□□ -1.03
HDAC6-214ENST00000465269 H3BRM9 83 aa8.58□□□□□ -1.04
HDAC6-214ENST00000465269 LINC00304Q8N9R0 145 aa8.58□□□□□ -1.04
HDAC6-214ENST00000465269 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
HDAC6-214ENST00000465269 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
HDAC6-214ENST00000465269 PET117Q6UWS5 81 aa8.57□□□□□ -1.04
HDAC6-214ENST00000465269 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
HDAC6-214ENST00000465269 DPM2O94777 84 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 PRSS2P07478 247 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 KIAA0087Q14695 138 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
HDAC6-214ENST00000465269 NDUFA1O15239 70 aa8.55□□□□□ -1.04
HDAC6-214ENST00000465269 IGKCP01834 107 aa8.55□□□□□ -1.04
HDAC6-214ENST00000465269 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
HDAC6-214ENST00000465269 PLNP26678 52 aa8.54□□□□□ -1.04
HDAC6-214ENST00000465269 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
HDAC6-214ENST00000465269 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
HDAC6-214ENST00000465269 COX7B2Q8TF08 81 aa8.54□□□□□ -1.04
HDAC6-214ENST00000465269 CKS1BP61024 79 aa8.53□□□□□ -1.04
HDAC6-214ENST00000465269 Q8IZM0 81 aa8.53□□□□□ -1.04
HDAC6-214ENST00000465269 MT1HP80294 61 aa8.52□□□□□ -1.05
HDAC6-214ENST00000465269 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
HDAC6-214ENST00000465269 C20orf202A1L168 122 aa8.5□□□□□ -1.05
HDAC6-214ENST00000465269 F8WDY8 70 aa8.5□□□□□ -1.05
HDAC6-214ENST00000465269 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
HDAC6-214ENST00000465269 LINC00337Q8N6G1 96 aa8.5□□□□□ -1.05
HDAC6-214ENST00000465269 RPL28P46779 137 aaKnown RBP8.49□□□□□ -1.05
HDAC6-214ENST00000465269 KRTAP19-2Q3LHN2 52 aa8.49□□□□□ -1.05
HDAC6-214ENST00000465269 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
HDAC6-214ENST00000465269 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
HDAC6-214ENST00000465269 HERVK_113P61574 105 aa8.48□□□□□ -1.05
HDAC6-214ENST00000465269 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
HDAC6-214ENST00000465269 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-214ENST00000465269 CXCL5P42830 114 aa8.47□□□□□ -1.05
HDAC6-214ENST00000465269 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
HDAC6-214ENST00000465269 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
HDAC6-214ENST00000465269 LEPROTO15243 131 aa8.46□□□□□ -1.06
HDAC6-214ENST00000465269 BCE1O60756 84 aa8.46□□□□□ -1.06
HDAC6-214ENST00000465269 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-214ENST00000465269 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
HDAC6-214ENST00000465269 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-214ENST00000465269 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
HDAC6-214ENST00000465269 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
HDAC6-214ENST00000465269 E9PLD3 99 aa8.44□□□□□ -1.06
HDAC6-214ENST00000465269 J3QQQ9 107 aa8.44□□□□□ -1.06
HDAC6-214ENST00000465269 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
HDAC6-214ENST00000465269 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
HDAC6-214ENST00000465269 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
HDAC6-214ENST00000465269 SEC61BP60468 96 aaKnown RBP8.43□□□□□ -1.06
HDAC6-214ENST00000465269 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
HDAC6-214ENST00000465269 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
HDAC6-214ENST00000465269 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
HDAC6-214ENST00000465269 PFN2P35080 140 aa8.42□□□□□ -1.06
HDAC6-214ENST00000465269 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
HDAC6-214ENST00000465269 AKR1D1P51857 326 aa8.41□□□□□ -1.06
HDAC6-214ENST00000465269 FAM229BQ4G0N7 80 aa8.41□□□□□ -1.06
HDAC6-214ENST00000465269 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-214ENST00000465269 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
HDAC6-214ENST00000465269 NMUP48645 174 aa8.39□□□□□ -1.07
HDAC6-214ENST00000465269 LINC00158P58513 81 aa8.39□□□□□ -1.07
HDAC6-214ENST00000465269 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-214ENST00000465269 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
HDAC6-214ENST00000465269 MRPL55Q7Z7F7 128 aaKnown RBP8.39□□□□□ -1.07
HDAC6-214ENST00000465269 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
HDAC6-214ENST00000465269 USH2AO75445 5202 aa8.39□□□□□ -1.07
HDAC6-214ENST00000465269 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
HDAC6-214ENST00000465269 HERV-K104P63124 156 aa8.38□□□□□ -1.07
HDAC6-214ENST00000465269 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
HDAC6-214ENST00000465269 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
HDAC6-214ENST00000465269 UBE2AP49459 152 aa8.37□□□□□ -1.07
HDAC6-214ENST00000465269 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-214ENST00000465269 LINC00167Q96N53 147 aa8.37□□□□□ -1.07
HDAC6-214ENST00000465269 COX17Q14061 63 aa8.36□□□□□ -1.07
HDAC6-214ENST00000465269 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
HDAC6-214ENST00000465269 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
HDAC6-214ENST00000465269 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
HDAC6-214ENST00000465269 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
HDAC6-214ENST00000465269 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms