RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
RPUSD3-211ENST00000464783 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
RPUSD3-211ENST00000464783 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
RPUSD3-211ENST00000464783 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
RPUSD3-211ENST00000464783 E9PLD3 99 aa7.43□□□□□ -1.22
RPUSD3-211ENST00000464783 J3QL48 77 aa7.43□□□□□ -1.22
RPUSD3-211ENST00000464783 NMUP48645 174 aa7.43□□□□□ -1.22
RPUSD3-211ENST00000464783 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
RPUSD3-211ENST00000464783 TP73-AS1Q9UF72 201 aa7.43□□□□□ -1.22
RPUSD3-211ENST00000464783 PKHD1L1Q86WI1 4243 aa7.42□□□□□ -1.22
RPUSD3-211ENST00000464783 GAGE10A6NGK3 116 aa7.42□□□□□ -1.22
RPUSD3-211ENST00000464783 SPINK6Q6UWN8 80 aa7.42□□□□□ -1.22
RPUSD3-211ENST00000464783 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
RPUSD3-211ENST00000464783 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
RPUSD3-211ENST00000464783 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
RPUSD3-211ENST00000464783 IGLV5-37A0A075B6J1 123 aa7.41□□□□□ -1.22
RPUSD3-211ENST00000464783 MIR7-3HGQ8N6C7 128 aa7.41□□□□□ -1.22
RPUSD3-211ENST00000464783 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 KRTAP29-1A8MX34 341 aaPredicted RBP7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 IGLV7-43P04211 117 aa7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 AKR1D1P51857 326 aa7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 TMA7Q9Y2S6 64 aaKnown RBP7.4□□□□□ -1.22
RPUSD3-211ENST00000464783 OXTP01178 125 aa7.39□□□□□ -1.23
RPUSD3-211ENST00000464783 VPREB1P12018 145 aa7.39□□□□□ -1.23
RPUSD3-211ENST00000464783 SNRPEP62304 92 aaKnown RBP7.39□□□□□ -1.23
RPUSD3-211ENST00000464783 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
RPUSD3-211ENST00000464783 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 DAND5Q8N907 189 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 MIEN1Q9BRT3 115 aa7.38□□□□□ -1.23
RPUSD3-211ENST00000464783 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
RPUSD3-211ENST00000464783 IGKV2D-26A0A0A0MRZ7 120 aa7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 Q8NDZ9 215 aa7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
RPUSD3-211ENST00000464783 NCR3O14931 201 aa7.35□□□□□ -1.23
RPUSD3-211ENST00000464783 BCE1O60756 84 aa7.35□□□□□ -1.23
RPUSD3-211ENST00000464783 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 M0R378 163 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 NPC2P61916 151 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 TTTY13Q9BZ97 58 aa7.34□□□□□ -1.23
RPUSD3-211ENST00000464783 HSBP1L1C9JCN9 74 aa7.33□□□□□ -1.24
RPUSD3-211ENST00000464783 H0Y9J4 135 aa7.33□□□□□ -1.24
RPUSD3-211ENST00000464783 UBE2AP49459 152 aa7.33□□□□□ -1.24
RPUSD3-211ENST00000464783 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 ZNF861PO60384 105 aa7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
RPUSD3-211ENST00000464783 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 TIMM17BO60830 172 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 S100A12P80511 92 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 FAT3Q8TDW7 4589 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
RPUSD3-211ENST00000464783 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
RPUSD3-211ENST00000464783 LINC01600Q96MT4 127 aa7.3□□□□□ -1.24
RPUSD3-211ENST00000464783 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
RPUSD3-211ENST00000464783 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
RPUSD3-211ENST00000464783 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 TRBV10-2A0A0K0K1G8 114 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 PRYO14603 147 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 NDUFC2O95298 119 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 PRLHP81277 87 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 S100A7L2Q5SY68 101 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 LINC00308Q8TCZ7 52 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 LITAFQ99732 161 aa7.28□□□□□ -1.24
RPUSD3-211ENST00000464783 DDTP30046 118 aa7.27□□□□□ -1.25
RPUSD3-211ENST00000464783 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
RPUSD3-211ENST00000464783 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
RPUSD3-211ENST00000464783 COPS9Q8WXC6 57 aa7.26□□□□□ -1.25
RPUSD3-211ENST00000464783 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
RPUSD3-211ENST00000464783 ETDCA0A1B0GVM5 59 aa7.25□□□□□ -1.25
RPUSD3-211ENST00000464783 SPANXDQ9BXN6 97 aa7.25□□□□□ -1.25
RPUSD3-211ENST00000464783 KCNQ1DNQ9H478 68 aa7.25□□□□□ -1.25
RPUSD3-211ENST00000464783 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
RPUSD3-211ENST00000464783 LINC00337Q8N6G1 96 aa7.23□□□□□ -1.25
RPUSD3-211ENST00000464783 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
RPUSD3-211ENST00000464783 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
RPUSD3-211ENST00000464783 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
RPUSD3-211ENST00000464783 TRAV23DV6A0A075B6W5 121 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 IFITM1P13164 125 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 Q6ZVH6 145 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 HERC1Q15751 4861 aa7.22□□□□□ -1.25
RPUSD3-211ENST00000464783 SPRR1AP35321 89 aa7.21□□□□□ -1.26
RPUSD3-211ENST00000464783 LINC00518Q8N0U6 118 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms