RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 PSORS1C2Q9UIG4 136 aa12.41□□□□□ -0.42
CDK11A-211ENST00000464748 S100A2P29034 98 aa12.4□□□□□ -0.42
CDK11A-211ENST00000464748 HNRNPA3P51991 378 aaKnown RBP12.4□□□□□ -0.42
CDK11A-211ENST00000464748 TSPEAR-AS2P59090 65 aa12.4□□□□□ -0.42
CDK11A-211ENST00000464748 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.42
CDK11A-211ENST00000464748 MRPL55Q7Z7F7 128 aaKnown RBP12.39□□□□□ -0.43
CDK11A-211ENST00000464748 RPL24P83731 157 aaKnown RBP12.38□□□□□ -0.43
CDK11A-211ENST00000464748 NKAPP1Q8N9T2 125 aa12.38□□□□□ -0.43
CDK11A-211ENST00000464748 PKHD1L1Q86WI1 4243 aa12.37□□□□□ -0.43
CDK11A-211ENST00000464748 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
CDK11A-211ENST00000464748 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
CDK11A-211ENST00000464748 SPINK6Q6UWN8 80 aa12.36□□□□□ -0.43
CDK11A-211ENST00000464748 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
CDK11A-211ENST00000464748 OXTP01178 125 aa12.35□□□□□ -0.43
CDK11A-211ENST00000464748 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
CDK11A-211ENST00000464748 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
CDK11A-211ENST00000464748 VPREB1P12018 145 aa12.33□□□□□ -0.44
CDK11A-211ENST00000464748 SRSF9Q13242 221 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK11A-211ENST00000464748 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
CDK11A-211ENST00000464748 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
CDK11A-211ENST00000464748 LINC00167Q96N53 147 aa12.32□□□□□ -0.44
CDK11A-211ENST00000464748 IGLV7-43P04211 117 aa12.31□□□□□ -0.44
CDK11A-211ENST00000464748 MYCBP2O75592 4640 aa12.3□□□□□ -0.44
CDK11A-211ENST00000464748 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
CDK11A-211ENST00000464748 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
CDK11A-211ENST00000464748 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
CDK11A-211ENST00000464748 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
CDK11A-211ENST00000464748 A0A0J9YXY3 114 aa12.27□□□□□ -0.45
CDK11A-211ENST00000464748 GAGE10A6NGK3 116 aa12.27□□□□□ -0.45
CDK11A-211ENST00000464748 J3QL48 77 aa12.27□□□□□ -0.45
CDK11A-211ENST00000464748 REG3GQ6UW15 175 aa12.27□□□□□ -0.45
CDK11A-211ENST00000464748 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.45
CDK11A-211ENST00000464748 RPL37AP8A6NKH3 93 aa12.26□□□□□ -0.45
CDK11A-211ENST00000464748 DIRC1Q969H9 104 aa12.26□□□□□ -0.45
CDK11A-211ENST00000464748 IGKV2D-26A0A0A0MRZ7 120 aa12.25□□□□□ -0.45
CDK11A-211ENST00000464748 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
CDK11A-211ENST00000464748 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
CDK11A-211ENST00000464748 IGLV1-50A0A075B6I6 118 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 M0R378 163 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 BCE1O60756 84 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 TIMM17BO60830 172 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 ATOH7Q8N100 152 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 Q8NDZ9 215 aa12.24□□□□□ -0.45
CDK11A-211ENST00000464748 DAND5Q8N907 189 aa12.23□□□□□ -0.45
CDK11A-211ENST00000464748 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
CDK11A-211ENST00000464748 IGKV2-28A0A075B6P5 120 aa12.21□□□□□ -0.45
CDK11A-211ENST00000464748 ZNF861PO60384 105 aa12.21□□□□□ -0.45
CDK11A-211ENST00000464748 IGKV2D-28P01615 120 aa12.21□□□□□ -0.45
CDK11A-211ENST00000464748 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.46
CDK11A-211ENST00000464748 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
CDK11A-211ENST00000464748 H0Y9J4 135 aa12.2□□□□□ -0.46
CDK11A-211ENST00000464748 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
CDK11A-211ENST00000464748 NDUFC2O95298 119 aa12.19□□□□□ -0.46
CDK11A-211ENST00000464748 TRBV10-2A0A0K0K1G8 114 aa12.18□□□□□ -0.46
CDK11A-211ENST00000464748 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
CDK11A-211ENST00000464748 LINC01600Q96MT4 127 aa12.18□□□□□ -0.46
CDK11A-211ENST00000464748 LITAFQ99732 161 aa12.18□□□□□ -0.46
CDK11A-211ENST00000464748 TTTY13Q9BZ97 58 aa12.18□□□□□ -0.46
CDK11A-211ENST00000464748 FAT3Q8TDW7 4589 aa12.17□□□□□ -0.46
CDK11A-211ENST00000464748 NCR3O14931 201 aa12.17□□□□□ -0.46
CDK11A-211ENST00000464748 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
CDK11A-211ENST00000464748 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
CDK11A-211ENST00000464748 LRP1Q07954 4544 aaKnown RBP12.17□□□□□ -0.46
CDK11A-211ENST00000464748 TMEM126AQ9H061 195 aa12.16□□□□□ -0.46
CDK11A-211ENST00000464748 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
CDK11A-211ENST00000464748 SCGB1D1O95968 90 aa12.15□□□□□ -0.46
CDK11A-211ENST00000464748 UBE2AP49459 152 aa12.15□□□□□ -0.46
CDK11A-211ENST00000464748 S100A12P80511 92 aa12.15□□□□□ -0.46
CDK11A-211ENST00000464748 PRYO14603 147 aa12.14□□□□□ -0.47
CDK11A-211ENST00000464748 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
CDK11A-211ENST00000464748 LINC00308Q8TCZ7 52 aa12.13□□□□□ -0.47
CDK11A-211ENST00000464748 COPS9Q8WXC6 57 aa12.13□□□□□ -0.47
CDK11A-211ENST00000464748 NPC2P61916 151 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 KRTAP13-1Q8IUC0 172 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 PCP2Q8IVA1 136 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 SPANXCQ9NY87 97 aa12.12□□□□□ -0.47
CDK11A-211ENST00000464748 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
CDK11A-211ENST00000464748 Q6ZVH6 145 aa12.11□□□□□ -0.47
CDK11A-211ENST00000464748 FAM19A1Q7Z5A9 133 aa12.11□□□□□ -0.47
CDK11A-211ENST00000464748 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
CDK11A-211ENST00000464748 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
CDK11A-211ENST00000464748 DDTP30046 118 aa12.09□□□□□ -0.47
CDK11A-211ENST00000464748 EIF4EBP3O60516 100 aaPredicted RBP12.08□□□□□ -0.48
CDK11A-211ENST00000464748 IFITM1P13164 125 aa12.08□□□□□ -0.48
CDK11A-211ENST00000464748 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
CDK11A-211ENST00000464748 CBY1Q9Y3M2 126 aa12.08□□□□□ -0.48
CDK11A-211ENST00000464748 SPRR1AP35321 89 aa12.07□□□□□ -0.48
CDK11A-211ENST00000464748 LINC00337Q8N6G1 96 aa12.07□□□□□ -0.48
CDK11A-211ENST00000464748 IGLV6-57P01721 117 aa12.06□□□□□ -0.48
CDK11A-211ENST00000464748 PRLHP81277 87 aa12.06□□□□□ -0.48
CDK11A-211ENST00000464748 KRTAP1-4P0C5Y4 121 aa12.05□□□□□ -0.48
CDK11A-211ENST00000464748 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
CDK11A-211ENST00000464748 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
CDK11A-211ENST00000464748 ETDCA0A1B0GVM5 59 aa12.04□□□□□ -0.48
CDK11A-211ENST00000464748 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-211ENST00000464748 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
CDK11A-211ENST00000464748 KRTAP4-16G5E9R7 235 aaPredicted RBP12.01□□□□□ -0.49
CDK11A-211ENST00000464748 RPL13AP40429 203 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms