RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 NISCHQ9Y2I1 1504 aa48.42■■■■■ 5.34
CDK11A-211ENST00000464748 CCDC180Q9P1Z9 1646 aa43.06■■■■■ 4.48
CDK11A-211ENST00000464748 ABCC9O60706 1549 aa41.82■■■■■ 4.29
CDK11A-211ENST00000464748 NACADO15069 1562 aa40.44■■■■■ 4.06
CDK11A-211ENST00000464748 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
CDK11A-211ENST00000464748 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
CDK11A-211ENST00000464748 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
CDK11A-211ENST00000464748 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
CDK11A-211ENST00000464748 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
CDK11A-211ENST00000464748 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
CDK11A-211ENST00000464748 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
CDK11A-211ENST00000464748 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
CDK11A-211ENST00000464748 PABPN1Q86U42 306 aaKnown RBP eCLIP39.05■■■■□ 3.84
CDK11A-211ENST00000464748 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
CDK11A-211ENST00000464748 DNAJC5BQ9UF47 199 aa38.15■■■■□ 3.7
CDK11A-211ENST00000464748 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
CDK11A-211ENST00000464748 CC2D2AQ9P2K1 1620 aa37.89■■■■□ 3.66
CDK11A-211ENST00000464748 CECR2Q9BXF3 1484 aa37.61■■■■□ 3.61
CDK11A-211ENST00000464748 BAZ1AQ9NRL2 1556 aaPredicted RBP37.55■■■■□ 3.6
CDK11A-211ENST00000464748 SMARCA4P51532 1647 aa37.54■■■■□ 3.6
CDK11A-211ENST00000464748 SMARCA2P51531 1590 aa37.31■■■■□ 3.56
CDK11A-211ENST00000464748 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
CDK11A-211ENST00000464748 NCAPD3P42695 1498 aa37.26■■■■□ 3.56
CDK11A-211ENST00000464748 MROH2BQ7Z745 1585 aa37.26■■■■□ 3.56
CDK11A-211ENST00000464748 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
CDK11A-211ENST00000464748 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
CDK11A-211ENST00000464748 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.51
CDK11A-211ENST00000464748 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
CDK11A-211ENST00000464748 WIZO95785 1651 aa36.87■■■■□ 3.49
CDK11A-211ENST00000464748 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
CDK11A-211ENST00000464748 LAMC3Q9Y6N6 1575 aa36.29■■■■□ 3.4
CDK11A-211ENST00000464748 NESP48681 1621 aa36.22■■■■□ 3.39
CDK11A-211ENST00000464748 CADPSQ9ULU8 1353 aa36.17■■■■□ 3.38
CDK11A-211ENST00000464748 ERCC6Q03468 1493 aa36.1■■■■□ 3.37
CDK11A-211ENST00000464748 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
CDK11A-211ENST00000464748 PDS5BQ9NTI5 1447 aa36.03■■■■□ 3.36
CDK11A-211ENST00000464748 SUPT5HO00267 1087 aaKnown RBP36.01■■■■□ 3.36
CDK11A-211ENST00000464748 CFTRP13569 1480 aa36■■■■□ 3.35
CDK11A-211ENST00000464748 KIF21AQ7Z4S6 1674 aa35.86■■■■□ 3.33
CDK11A-211ENST00000464748 PRDM2Q13029 1718 aa35.82■■■■□ 3.32
CDK11A-211ENST00000464748 FANCD2Q9BXW9 1451 aa35.75■■■■□ 3.31
CDK11A-211ENST00000464748 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
CDK11A-211ENST00000464748 CUX2O14529 1486 aa35.72■■■■□ 3.31
CDK11A-211ENST00000464748 CEP164Q9UPV0 1460 aa35.72■■■■□ 3.31
CDK11A-211ENST00000464748 MRC2Q9UBG0 1479 aa35.63■■■■□ 3.29
CDK11A-211ENST00000464748 WDR62O43379 1518 aa35.52■■■■□ 3.28
CDK11A-211ENST00000464748 URB2Q14146 1524 aaKnown RBP35.35■■■■□ 3.25
CDK11A-211ENST00000464748 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
CDK11A-211ENST00000464748 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
CDK11A-211ENST00000464748 TOPBP1Q92547 1522 aa35.2■■■■□ 3.23
CDK11A-211ENST00000464748 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
CDK11A-211ENST00000464748 CUX1P39880 1505 aa34.97■■■■□ 3.19
CDK11A-211ENST00000464748 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
CDK11A-211ENST00000464748 FGD5Q6ZNL6 1462 aa34.84■■■■□ 3.17
CDK11A-211ENST00000464748 WRNQ14191 1432 aaPredicted RBP eCLIP34.83■■■■□ 3.17
CDK11A-211ENST00000464748 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
CDK11A-211ENST00000464748 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
CDK11A-211ENST00000464748 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
CDK11A-211ENST00000464748 SOGA1O94964 1423 aa34.75■■■■□ 3.15
CDK11A-211ENST00000464748 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
CDK11A-211ENST00000464748 SYNJ1O43426 1573 aa34.7■■■■□ 3.14
CDK11A-211ENST00000464748 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
CDK11A-211ENST00000464748 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
CDK11A-211ENST00000464748 EIF4G3O43432 1585 aaKnown RBP34.64■■■■□ 3.14
CDK11A-211ENST00000464748 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
CDK11A-211ENST00000464748 AQRO60306 1485 aaKnown RBP eCLIP34.53■■■■□ 3.121e-8■■□□□ 13.7
CDK11A-211ENST00000464748 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
CDK11A-211ENST00000464748 ABCA5Q8WWZ7 1642 aa34.39■■■■□ 3.1
CDK11A-211ENST00000464748 GAPVD1Q14C86 1478 aa34.38■■■■□ 3.09
CDK11A-211ENST00000464748 GRIN2BQ13224 1484 aa34.37■■■■□ 3.09
CDK11A-211ENST00000464748 DNAJC5Q9H3Z4 198 aa34.34■■■■□ 3.09
CDK11A-211ENST00000464748 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
CDK11A-211ENST00000464748 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
CDK11A-211ENST00000464748 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
CDK11A-211ENST00000464748 OSCARQ8IYS5 282 aa34.2■■■■□ 3.07
CDK11A-211ENST00000464748 CHD1O14646 1710 aa34.17■■■■□ 3.06
CDK11A-211ENST00000464748 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
CDK11A-211ENST00000464748 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
CDK11A-211ENST00000464748 KIF27Q86VH2 1401 aa34.12■■■■□ 3.05
CDK11A-211ENST00000464748 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
CDK11A-211ENST00000464748 FBLN2P98095 1184 aa34.07■■■■□ 3.04
CDK11A-211ENST00000464748 CHMP7Q8WUX9 453 aaPredicted RBP34.06■■■■□ 3.04
CDK11A-211ENST00000464748 ADAMTS12P58397 1594 aa34.05■■■■□ 3.04
CDK11A-211ENST00000464748 FHAD1B1AJZ9 1412 aa34.01■■■■□ 3.03
CDK11A-211ENST00000464748 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
CDK11A-211ENST00000464748 IGF1RP08069 1367 aa33.9■■■■□ 3.02
CDK11A-211ENST00000464748 CUL7Q14999 1698 aa33.9■■■■□ 3.02
CDK11A-211ENST00000464748 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
CDK11A-211ENST00000464748 NUP160Q12769 1436 aa33.77■■■■□ 3
CDK11A-211ENST00000464748 CHIC1Q5VXU3 224 aa33.73■■■□□ 2.99
CDK11A-211ENST00000464748 CARMIL1Q5VZK9 1371 aa33.72■■■□□ 2.99
CDK11A-211ENST00000464748 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
CDK11A-211ENST00000464748 CEP170Q5SW79 1584 aa33.71■■■□□ 2.99
CDK11A-211ENST00000464748 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
CDK11A-211ENST00000464748 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
CDK11A-211ENST00000464748 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
CDK11A-211ENST00000464748 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
CDK11A-211ENST00000464748 EEA1Q15075 1411 aa33.62■■■□□ 2.97
CDK11A-211ENST00000464748 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.97
CDK11A-211ENST00000464748 SHROOM2Q13796 1616 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms