RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 NMUP48645 174 aa11.76□□□□□ -0.53
LMNB1-204ENST00000463908 PLA2G2DQ9UNK4 145 aa11.76□□□□□ -0.53
LMNB1-204ENST00000463908 C22orf24Q9Y442 160 aa11.76□□□□□ -0.53
LMNB1-204ENST00000463908 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
LMNB1-204ENST00000463908 M0QXV9 152 aa11.74□□□□□ -0.53
LMNB1-204ENST00000463908 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
LMNB1-204ENST00000463908 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
LMNB1-204ENST00000463908 Q8NDZ9 215 aa11.73□□□□□ -0.53
LMNB1-204ENST00000463908 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
LMNB1-204ENST00000463908 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
LMNB1-204ENST00000463908 LINC00587B1AMM8 73 aa11.72□□□□□ -0.53
LMNB1-204ENST00000463908 HNRNPA3P51991 378 aaKnown RBP11.72□□□□□ -0.53
LMNB1-204ENST00000463908 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
LMNB1-204ENST00000463908 IGLV5-37A0A075B6J1 123 aa11.71□□□□□ -0.53
LMNB1-204ENST00000463908 AKR1D1P51857 326 aa11.71□□□□□ -0.53
LMNB1-204ENST00000463908 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
LMNB1-204ENST00000463908 TP73-AS1Q9UF72 201 aa11.7□□□□□ -0.54
LMNB1-204ENST00000463908 PSORS1C2Q9UIG4 136 aa11.7□□□□□ -0.54
LMNB1-204ENST00000463908 VPREB1P12018 145 aa11.69□□□□□ -0.54
LMNB1-204ENST00000463908 DAND5Q8N907 189 aa11.69□□□□□ -0.54
LMNB1-204ENST00000463908 FLG2Q5D862 2391 aaPredicted RBP11.68□□□□□ -0.54
LMNB1-204ENST00000463908 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
LMNB1-204ENST00000463908 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
LMNB1-204ENST00000463908 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
LMNB1-204ENST00000463908 TMA7Q9Y2S6 64 aaKnown RBP11.68□□□□□ -0.54
LMNB1-204ENST00000463908 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
LMNB1-204ENST00000463908 ZNF815PA8K554 130 aa11.66□□□□□ -0.54
LMNB1-204ENST00000463908 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
LMNB1-204ENST00000463908 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
LMNB1-204ENST00000463908 UBE2BP63146 152 aa11.65□□□□□ -0.54
LMNB1-204ENST00000463908 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
LMNB1-204ENST00000463908 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
LMNB1-204ENST00000463908 LITAFQ99732 161 aa11.65□□□□□ -0.54
LMNB1-204ENST00000463908 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
LMNB1-204ENST00000463908 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
LMNB1-204ENST00000463908 RPL37AP8A6NKH3 93 aa11.63□□□□□ -0.55
LMNB1-204ENST00000463908 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
LMNB1-204ENST00000463908 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
LMNB1-204ENST00000463908 C1orf137Q5JT78 98 aa11.63□□□□□ -0.55
LMNB1-204ENST00000463908 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
LMNB1-204ENST00000463908 NKAPP1Q8N9T2 125 aa11.63□□□□□ -0.55
LMNB1-204ENST00000463908 SOSTDC1Q6X4U4 206 aa11.62□□□□□ -0.55
LMNB1-204ENST00000463908 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
LMNB1-204ENST00000463908 TIMM17BO60830 172 aa11.61□□□□□ -0.55
LMNB1-204ENST00000463908 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
LMNB1-204ENST00000463908 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
LMNB1-204ENST00000463908 JOSD1Q15040 202 aaPredicted RBP11.59□□□□□ -0.55
LMNB1-204ENST00000463908 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
LMNB1-204ENST00000463908 NPC2P61916 151 aa11.58□□□□□ -0.56
LMNB1-204ENST00000463908 M0R378 163 aa11.57□□□□□ -0.56
LMNB1-204ENST00000463908 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
LMNB1-204ENST00000463908 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
LMNB1-204ENST00000463908 SPINK6Q6UWN8 80 aa11.56□□□□□ -0.56
LMNB1-204ENST00000463908 SCGB1D4Q6XE38 83 aa11.56□□□□□ -0.56
LMNB1-204ENST00000463908 LINC00308Q8TCZ7 52 aa11.56□□□□□ -0.56
LMNB1-204ENST00000463908 NCR3O14931 201 aa11.55□□□□□ -0.56
LMNB1-204ENST00000463908 NDUFC2O95298 119 aa11.53□□□□□ -0.56
LMNB1-204ENST00000463908 MIEN1Q9BRT3 115 aa11.53□□□□□ -0.56
LMNB1-204ENST00000463908 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
LMNB1-204ENST00000463908 TMEM238C9JI98 176 aa11.52□□□□□ -0.57
LMNB1-204ENST00000463908 BCE1O60756 84 aa11.52□□□□□ -0.57
LMNB1-204ENST00000463908 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
LMNB1-204ENST00000463908 SPANXDQ9BXN6 97 aa11.52□□□□□ -0.57
LMNB1-204ENST00000463908 SPANXCQ9NY87 97 aa11.52□□□□□ -0.57
LMNB1-204ENST00000463908 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
LMNB1-204ENST00000463908 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
LMNB1-204ENST00000463908 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
LMNB1-204ENST00000463908 TRBV10-3A0A0K0K1G6 114 aa11.49□□□□□ -0.57
LMNB1-204ENST00000463908 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
LMNB1-204ENST00000463908 ZNF861PO60384 105 aa11.49□□□□□ -0.57
LMNB1-204ENST00000463908 COX8AP10176 69 aa11.49□□□□□ -0.57
LMNB1-204ENST00000463908 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
LMNB1-204ENST00000463908 PAM16Q9Y3D7 125 aa11.49□□□□□ -0.57
LMNB1-204ENST00000463908 REG3GQ6UW15 175 aa11.48□□□□□ -0.57
LMNB1-204ENST00000463908 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
LMNB1-204ENST00000463908 SPATA45Q537H7 98 aa11.47□□□□□ -0.57
LMNB1-204ENST00000463908 KRTAP13-1Q8IUC0 172 aa11.47□□□□□ -0.57
LMNB1-204ENST00000463908 MUSTN1Q8IVN3 82 aa11.47□□□□□ -0.57
LMNB1-204ENST00000463908 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
LMNB1-204ENST00000463908 OXTP01178 125 aa11.46□□□□□ -0.57
LMNB1-204ENST00000463908 Q6ZVH6 145 aa11.46□□□□□ -0.57
LMNB1-204ENST00000463908 C14orf144Q96I85 54 aa11.46□□□□□ -0.57
LMNB1-204ENST00000463908 VAMP8Q9BV40 100 aa11.46□□□□□ -0.57
LMNB1-204ENST00000463908 DLEU1O43261 78 aa11.45□□□□□ -0.58
LMNB1-204ENST00000463908 IFITM1P13164 125 aa11.45□□□□□ -0.58
LMNB1-204ENST00000463908 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
LMNB1-204ENST00000463908 H0Y9J4 135 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 IGLV6-57P01721 117 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 DDTP30046 118 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 SPRR1AP35321 89 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 PPDPFQ9H3Y8 114 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
LMNB1-204ENST00000463908 PRYO14603 147 aa11.43□□□□□ -0.58
LMNB1-204ENST00000463908 KRTAP4-16G5E9R7 235 aaPredicted RBP11.42□□□□□ -0.58
LMNB1-204ENST00000463908 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
LMNB1-204ENST00000463908 FAM19A1Q7Z5A9 133 aa11.42□□□□□ -0.58
LMNB1-204ENST00000463908 UBE2AP49459 152 aa11.41□□□□□ -0.58
LMNB1-204ENST00000463908 PRLHP81277 87 aa11.41□□□□□ -0.58
LMNB1-204ENST00000463908 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
LMNB1-204ENST00000463908 LINC01600Q96MT4 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms