RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HIGD1CA8MV81 97 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 PIPP12273 146 aaPredicted RBP1.04□□□□□ -2.24
SMC4-203ENST00000462668 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
SMC4-203ENST00000462668 PKIAP61925 76 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 ARL14EPLP0DKL9 152 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 SPATA45Q537H7 98 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 XAF1Q6GPH4 301 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 CCKP06307 115 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 CCL3L1P16619 93 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 TMEM14CQ9P0S9 112 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 STAB1Q9NY15 2570 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 RP1L1Q8IWN7 2480 aaPredicted RBP1.04□□□□□ -2.24
SMC4-203ENST00000462668 TPRP12270 2363 aaKnown RBP1.04□□□□□ -2.24
SMC4-203ENST00000462668 TRBV7-1A0A0A6YYK4 115 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 SIX6O95475 246 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 ATP5EP56381 51 aaPredicted RBP1.04□□□□□ -2.24
SMC4-203ENST00000462668 CYP4F30PQ9H0H9 118 aa1.04□□□□□ -2.24
SMC4-203ENST00000462668 SSSCA1O60232 199 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 FXYD3Q14802 87 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 ARFGEF3Q5TH69 2177 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 CCDC168Q8NDH2 2452 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 TCRBV3S1A0A5B6 114 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 TMEM218A2RU14 115 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 UBE2G1P62253 170 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 C9orf153Q5TBE3 101 aa1.03□□□□□ -2.24
SMC4-203ENST00000462668 SPINK8P0C7L1 97 aa1.03□□□□□ -2.25
SMC4-203ENST00000462668 C10orf82Q8WW14 230 aa1.03□□□□□ -2.25
SMC4-203ENST00000462668 RBAKDNA6NC62 111 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 NCMAPQ5T1S8 102 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 C4orf33Q8N1A6 199 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 LINC00474Q9P2X8 69 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 APC2O95996 2303 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 MYO7AQ13402 2215 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 IL7P13232 177 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 MYO18AQ92614 2054 aaKnown RBP1.02□□□□□ -2.25
SMC4-203ENST00000462668 IGKV2-40A0A087WW87 121 aaPredicted RBP1.02□□□□□ -2.25
SMC4-203ENST00000462668 HCG22E2RYF7 251 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 M0R143 59 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 IGKV2D-40P01614 121 aaPredicted RBP1.02□□□□□ -2.25
SMC4-203ENST00000462668 UNQ5815/PRO19632Q6UWF5 114 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 SNURFQ9Y675 71 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 USH2AO75445 5202 aa1.02□□□□□ -2.25
SMC4-203ENST00000462668 UBE2L5PA0A1B0GUS4 154 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 LOC101927531A0A1B0GV80 90 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 K7EIL1 84 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 UBE2L3P68036 154 aaKnown RBP1.01□□□□□ -2.25
SMC4-203ENST00000462668 Q0VG73 95 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 PVALEFA0A1B0GWK0 134 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 FXYD4P59646 89 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 Q5VV11 94 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 DEFB119Q8N690 84 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 WFDC10AQ9H1F0 79 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 NEBP20929 6669 aa1.01□□□□□ -2.25
SMC4-203ENST00000462668 LINC00575Q6W349 94 aa1□□□□□ -2.25
SMC4-203ENST00000462668 KLKP1Q107X0 134 aa1□□□□□ -2.25
SMC4-203ENST00000462668 Q86TA4 180 aa1□□□□□ -2.25
SMC4-203ENST00000462668 DCDP81605 110 aaKnown RBP1□□□□□ -2.25
SMC4-203ENST00000462668 TRAV17A0A0B4J275 112 aa1□□□□□ -2.25
SMC4-203ENST00000462668 EFNA4P52798 201 aa1□□□□□ -2.25
SMC4-203ENST00000462668 SMR3AQ99954 134 aa1□□□□□ -2.25
SMC4-203ENST00000462668 SNAPC5O75971 98 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 ELOF1P60002 83 aaKnown RBP0.99□□□□□ -2.25
SMC4-203ENST00000462668 Q96NJ1 140 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 TRBV6-7A0A0A0MS04 114 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 JMJD1CQ15652 2540 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 IGKV2-29A2NJV5 120 aaPredicted RBP0.99□□□□□ -2.25
SMC4-203ENST00000462668 UBE2D3P61077 147 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 UBE2D2P62837 147 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 FAM167A-AS1Q96KT0 104 aa0.99□□□□□ -2.25
SMC4-203ENST00000462668 LCE6AA0A183 80 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 MYOZ3Q8TDC0 251 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 CNOT1A5YKK6 2376 aaKnown RBP0.98□□□□□ -2.25
SMC4-203ENST00000462668 SNCGO76070 127 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 MT-ATP8P03928 68 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 ZNF56Q15929 161 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 CDC42SE2Q9NRR3 84 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 CACNA1CQ13936 2221 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 DOCK10Q96BY6 2186 aa0.98□□□□□ -2.25
SMC4-203ENST00000462668 ACANP16112 2415 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 ALPK2Q86TB3 2170 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 LINC00208Q96KT6 92 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 TRAV23DV6A0A075B6W5 121 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 C6orf52Q5T4I8 152 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 ZGRF1Q86YA3 2104 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 AMELXQ99217 191 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 FCGBPQ9Y6R7 5405 aaPredicted RBP0.97□□□□□ -2.25
SMC4-203ENST00000462668 RBM3P98179 157 aaKnown RBP0.97□□□□□ -2.25
SMC4-203ENST00000462668 NOTCH1P46531 2555 aa0.97□□□□□ -2.25
SMC4-203ENST00000462668 MED12Q93074 2177 aa0.96□□□□□ -2.26
SMC4-203ENST00000462668 TRAV13-2A0A0B4J235 113 aa0.96□□□□□ -2.26
SMC4-203ENST00000462668 SSBP1Q04837 148 aaKnown RBP0.96□□□□□ -2.26
SMC4-203ENST00000462668 SVBPQ8N300 66 aa0.96□□□□□ -2.26
SMC4-203ENST00000462668 CD52P31358 61 aa0.96□□□□□ -2.26
SMC4-203ENST00000462668 TSLPQ969D9 159 aa0.96□□□□□ -2.26
SMC4-203ENST00000462668 HEATR1Q9H583 2144 aaKnown RBP0.96□□□□□ -2.26
SMC4-203ENST00000462668 FAM24AA6NFZ4 105 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 COL5A1-AS1Q5SY13 56 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 GTF2H5Q6ZYL4 71 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 CCL19Q99731 98 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms