RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
PKP4-208ENST00000462335 GAGE10A6NGK3 116 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 C3orf79P0CE67 100 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 SMIM13P0DJ93 91 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 S100A12P80511 92 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
PKP4-208ENST00000462335 RPL37AP8A6NKH3 93 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 HSBP1L1C9JCN9 74 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 LINC01545Q5VT33 79 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 SPINK6Q6UWN8 80 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 TP73-AS1Q9UF72 201 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
PKP4-208ENST00000462335 E9PLD3 99 aa5.94□□□□□ -1.46
PKP4-208ENST00000462335 OXTP01178 125 aa5.94□□□□□ -1.46
PKP4-208ENST00000462335 BOD1L2Q8IYS8 172 aa5.94□□□□□ -1.46
PKP4-208ENST00000462335 MIR7-3HGQ8N6C7 128 aa5.94□□□□□ -1.46
PKP4-208ENST00000462335 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
PKP4-208ENST00000462335 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
PKP4-208ENST00000462335 FAT1Q14517 4588 aa5.92□□□□□ -1.46
PKP4-208ENST00000462335 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
PKP4-208ENST00000462335 IGLV7-43P04211 117 aa5.92□□□□□ -1.46
PKP4-208ENST00000462335 UBE2AP49459 152 aa5.92□□□□□ -1.46
PKP4-208ENST00000462335 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 ZNF815PA8K554 130 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 M0R378 163 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 RPL28P46779 137 aaKnown RBP5.91□□□□□ -1.46
PKP4-208ENST00000462335 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
PKP4-208ENST00000462335 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
PKP4-208ENST00000462335 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 HIST3H2BBQ8N257 126 aa5.91□□□□□ -1.46
PKP4-208ENST00000462335 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
PKP4-208ENST00000462335 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
PKP4-208ENST00000462335 KRTAP29-1A8MX34 341 aaPredicted RBP5.9□□□□□ -1.46
PKP4-208ENST00000462335 HNRNPA3P51991 378 aaKnown RBP5.9□□□□□ -1.46
PKP4-208ENST00000462335 TSPEAR-AS2P59090 65 aa5.9□□□□□ -1.46
PKP4-208ENST00000462335 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.46
PKP4-208ENST00000462335 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.46
PKP4-208ENST00000462335 BCE1O60756 84 aa5.89□□□□□ -1.47
PKP4-208ENST00000462335 VPREB1P12018 145 aa5.89□□□□□ -1.47
PKP4-208ENST00000462335 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
PKP4-208ENST00000462335 DAND5Q8N907 189 aa5.89□□□□□ -1.47
PKP4-208ENST00000462335 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
PKP4-208ENST00000462335 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
PKP4-208ENST00000462335 NCR3O14931 201 aa5.88□□□□□ -1.47
PKP4-208ENST00000462335 NPC2P61916 151 aa5.88□□□□□ -1.47
PKP4-208ENST00000462335 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
PKP4-208ENST00000462335 ABCA13Q86UQ4 5058 aa5.88□□□□□ -1.47
PKP4-208ENST00000462335 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
PKP4-208ENST00000462335 ZNF861PO60384 105 aa5.87□□□□□ -1.47
PKP4-208ENST00000462335 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
PKP4-208ENST00000462335 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
PKP4-208ENST00000462335 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
PKP4-208ENST00000462335 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
PKP4-208ENST00000462335 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
PKP4-208ENST00000462335 H0Y9J4 135 aa5.86□□□□□ -1.47
PKP4-208ENST00000462335 TIMM17BO60830 172 aa5.86□□□□□ -1.47
PKP4-208ENST00000462335 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
PKP4-208ENST00000462335 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
PKP4-208ENST00000462335 HINT1P49773 126 aaPredicted RBP5.85□□□□□ -1.47
PKP4-208ENST00000462335 OR13C6PQ8NH95 151 aa5.85□□□□□ -1.47
PKP4-208ENST00000462335 SPANXB1Q9NS25 103 aaPredicted RBP5.85□□□□□ -1.47
PKP4-208ENST00000462335 C5orf52A6NGY3 159 aa5.84□□□□□ -1.47
PKP4-208ENST00000462335 DDTP30046 118 aa5.84□□□□□ -1.47
PKP4-208ENST00000462335 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.47
PKP4-208ENST00000462335 LINC01600Q96MT4 127 aa5.84□□□□□ -1.47
PKP4-208ENST00000462335 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
PKP4-208ENST00000462335 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.48
PKP4-208ENST00000462335 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
PKP4-208ENST00000462335 PRYO14603 147 aa5.83□□□□□ -1.48
PKP4-208ENST00000462335 NDUFC2O95298 119 aa5.83□□□□□ -1.48
PKP4-208ENST00000462335 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
PKP4-208ENST00000462335 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
PKP4-208ENST00000462335 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 Q6ZVH6 145 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 ARL17AQ8IVW1 177 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 LINC00518Q8N0U6 118 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 LINC00308Q8TCZ7 52 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 SPANXCQ9NY87 97 aa5.82□□□□□ -1.48
PKP4-208ENST00000462335 IFITM1P13164 125 aa5.81□□□□□ -1.48
PKP4-208ENST00000462335 RPL13AP40429 203 aaKnown RBP5.81□□□□□ -1.48
PKP4-208ENST00000462335 PRLHP81277 87 aa5.81□□□□□ -1.48
PKP4-208ENST00000462335 PCP2Q8IVA1 136 aa5.81□□□□□ -1.48
PKP4-208ENST00000462335 Q8NDZ9 215 aa5.81□□□□□ -1.48
PKP4-208ENST00000462335 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
PKP4-208ENST00000462335 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
PKP4-208ENST00000462335 TRAV23DV6A0A075B6W5 121 aa5.79□□□□□ -1.48
PKP4-208ENST00000462335 A6NDN8 102 aa5.79□□□□□ -1.48
PKP4-208ENST00000462335 LINC00337Q8N6G1 96 aa5.79□□□□□ -1.48
PKP4-208ENST00000462335 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
PKP4-208ENST00000462335 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
PKP4-208ENST00000462335 ZNF706Q9Y5V0 76 aaPredicted RBP5.79□□□□□ -1.48
PKP4-208ENST00000462335 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
PKP4-208ENST00000462335 CRYGAP11844 174 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms