RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 ERASQ7Z444 233 aa6.47□□□□□ -1.37
HCFC1-204ENST00000461098 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
HCFC1-204ENST00000461098 ZNF706Q9Y5V0 76 aaPredicted RBP6.47□□□□□ -1.37
HCFC1-204ENST00000461098 RPL24P83731 157 aaKnown RBP6.46□□□□□ -1.38
HCFC1-204ENST00000461098 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
HCFC1-204ENST00000461098 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
HCFC1-204ENST00000461098 CST9LQ9H4G1 147 aa6.45□□□□□ -1.38
HCFC1-204ENST00000461098 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
HCFC1-204ENST00000461098 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
HCFC1-204ENST00000461098 IGLV8-61A0A075B6I0 122 aa6.44□□□□□ -1.38
HCFC1-204ENST00000461098 IGLV5-39A0A0G2JS06 123 aa6.44□□□□□ -1.38
HCFC1-204ENST00000461098 SLC25A20O43772 301 aa6.44□□□□□ -1.38
HCFC1-204ENST00000461098 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
HCFC1-204ENST00000461098 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
HCFC1-204ENST00000461098 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
HCFC1-204ENST00000461098 SPRR1AP35321 89 aa6.43□□□□□ -1.38
HCFC1-204ENST00000461098 COX17Q14061 63 aa6.43□□□□□ -1.38
HCFC1-204ENST00000461098 G0S2P27469 103 aa6.42□□□□□ -1.38
HCFC1-204ENST00000461098 MOBPQ13875 183 aa6.42□□□□□ -1.38
HCFC1-204ENST00000461098 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
HCFC1-204ENST00000461098 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
HCFC1-204ENST00000461098 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
HCFC1-204ENST00000461098 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
HCFC1-204ENST00000461098 IGLV9-49A0A0B4J1Y8 123 aa6.4□□□□□ -1.38
HCFC1-204ENST00000461098 M0R2T5 61 aa6.4□□□□□ -1.38
HCFC1-204ENST00000461098 H3BRM9 83 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 PRYO14603 147 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 PEA15Q15121 130 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 PMVKQ15126 192 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 KCNQ1DNQ9H478 68 aa6.39□□□□□ -1.39
HCFC1-204ENST00000461098 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
HCFC1-204ENST00000461098 NDUFA5Q16718 116 aa6.38□□□□□ -1.39
HCFC1-204ENST00000461098 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
HCFC1-204ENST00000461098 ZNF22P17026 224 aaPredicted RBP6.37□□□□□ -1.39
HCFC1-204ENST00000461098 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
HCFC1-204ENST00000461098 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
HCFC1-204ENST00000461098 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
HCFC1-204ENST00000461098 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
HCFC1-204ENST00000461098 B5MCH6 92 aa6.34□□□□□ -1.39
HCFC1-204ENST00000461098 Q9BRP9 147 aa6.34□□□□□ -1.39
HCFC1-204ENST00000461098 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
HCFC1-204ENST00000461098 NCR3O14931 201 aa6.33□□□□□ -1.4
HCFC1-204ENST00000461098 LINC00158P58513 81 aa6.33□□□□□ -1.4
HCFC1-204ENST00000461098 IFITM2Q01629 132 aa6.33□□□□□ -1.4
HCFC1-204ENST00000461098 TRBV10-3A0A0K0K1G6 114 aa6.32□□□□□ -1.4
HCFC1-204ENST00000461098 A0A0U1RRA0 63 aa6.32□□□□□ -1.4
HCFC1-204ENST00000461098 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
HCFC1-204ENST00000461098 A0A096LNJ9 63 aa6.3□□□□□ -1.4
HCFC1-204ENST00000461098 C11orf86A6NJI1 115 aa6.3□□□□□ -1.4
HCFC1-204ENST00000461098 CLLU1Q5K131 121 aa6.3□□□□□ -1.4
HCFC1-204ENST00000461098 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
HCFC1-204ENST00000461098 BOD1L2Q8IYS8 172 aa6.3□□□□□ -1.4
HCFC1-204ENST00000461098 MT-ND4LP03901 98 aa6.29□□□□□ -1.4
HCFC1-204ENST00000461098 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
HCFC1-204ENST00000461098 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
HCFC1-204ENST00000461098 C9orf153Q5TBE3 101 aa6.28□□□□□ -1.4
HCFC1-204ENST00000461098 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
HCFC1-204ENST00000461098 TRAV9-1A0A075B6T8 112 aa6.27□□□□□ -1.41
HCFC1-204ENST00000461098 IGLV6-57P01721 117 aa6.27□□□□□ -1.41
HCFC1-204ENST00000461098 S100A1P23297 94 aa6.27□□□□□ -1.41
HCFC1-204ENST00000461098 NDUFA6P56556 154 aa6.27□□□□□ -1.41
HCFC1-204ENST00000461098 Q6ZRX8 168 aa6.27□□□□□ -1.41
HCFC1-204ENST00000461098 TMEM170BQ5T4T1 132 aa6.26□□□□□ -1.41
HCFC1-204ENST00000461098 MIR7-3HGQ8N6C7 128 aa6.26□□□□□ -1.41
HCFC1-204ENST00000461098 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
HCFC1-204ENST00000461098 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
HCFC1-204ENST00000461098 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
HCFC1-204ENST00000461098 SLC7A5P1Q8MH63 180 aa6.24□□□□□ -1.41
HCFC1-204ENST00000461098 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
HCFC1-204ENST00000461098 URB1-AS1Q96HZ7 61 aa6.24□□□□□ -1.41
HCFC1-204ENST00000461098 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
HCFC1-204ENST00000461098 HRCT1Q6UXD1 115 aa6.23□□□□□ -1.41
HCFC1-204ENST00000461098 COMMD7Q86VX2 200 aa6.23□□□□□ -1.41
HCFC1-204ENST00000461098 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
HCFC1-204ENST00000461098 DDTP30046 118 aa6.22□□□□□ -1.41
HCFC1-204ENST00000461098 UQCC3Q6UW78 93 aa6.22□□□□□ -1.41
HCFC1-204ENST00000461098 BAGE3Q86Y29 109 aa6.22□□□□□ -1.41
HCFC1-204ENST00000461098 SMCO4Q9NRQ5 59 aa6.22□□□□□ -1.41
HCFC1-204ENST00000461098 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
HCFC1-204ENST00000461098 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
HCFC1-204ENST00000461098 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
HCFC1-204ENST00000461098 PMCHL1Q16048 86 aa6.2□□□□□ -1.42
HCFC1-204ENST00000461098 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
HCFC1-204ENST00000461098 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
HCFC1-204ENST00000461098 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
HCFC1-204ENST00000461098 CFC1P0CG37 223 aa6.19□□□□□ -1.42
HCFC1-204ENST00000461098 S100A12P80511 92 aa6.19□□□□□ -1.42
HCFC1-204ENST00000461098 HBDP02042 147 aa6.18□□□□□ -1.42
HCFC1-204ENST00000461098 SPRR1BP22528 89 aa6.18□□□□□ -1.42
HCFC1-204ENST00000461098 HERV-K104P63124 156 aa6.18□□□□□ -1.42
HCFC1-204ENST00000461098 CHTOPQ9Y3Y2 248 aaKnown RBP6.18□□□□□ -1.42
HCFC1-204ENST00000461098 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
HCFC1-204ENST00000461098 LINC00614P0C842 121 aa6.17□□□□□ -1.42
HCFC1-204ENST00000461098 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
HCFC1-204ENST00000461098 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
HCFC1-204ENST00000461098 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.42
HCFC1-204ENST00000461098 TMEM218A2RU14 115 aa6.15□□□□□ -1.42
HCFC1-204ENST00000461098 LCE2BO14633 110 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms