RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SACSQ9NZJ4 4579 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 DNAH1Q9P2D7 4330 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV3-30P01768 117 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV3-30-5P0DP03 117 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 ZNF138P52744 262 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 SNRPD3P62318 126 aaKnown RBP3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 KLKP1Q107X0 134 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 FAM222AQ5U5X8 452 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 SLC25A29Q8N8R3 303 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 TM2D3Q9BRN9 247 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 Q9H3A6 140 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 TMEM14CQ9P0S9 112 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 Q9UF83 564 aa3.34□□□□□ -1.87
ATPAF1-203ENST00000460928 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 A0A0J9YY99 117 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 TRBV10-3A0A0K0K1G6 114 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 D6R8Y8 96 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 H7C423 109 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 LST1O00453 97 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 NDUFS5O43920 106 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 LGALS3P17931 250 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 DAZ2Q13117 558 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 LAGE3Q14657 143 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 DAZ4Q86SG3 579 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 CSNK1G2-AS1Q8NCQ2 148 aa3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 DAZ3Q9NR90 486 aaKnown RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 TIMM8BQ9Y5J9 83 aaPredicted RBP3.33□□□□□ -1.88
ATPAF1-203ENST00000460928 TRAV12-3A0A0B4J271 114 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 A0A0J9YWU9 116 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 HTN1P15515 57 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 RNASE4P34096 147 aaKnown RBP3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 SLC50A1Q9BRV3 221 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 TTTY13Q9BZ97 58 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 ALMS1Q8TCU4 4167 aa3.32□□□□□ -1.88
ATPAF1-203ENST00000460928 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 CKS2P33552 79 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 ZNF80P51504 273 aaPredicted RBP3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 APOC4P55056 127 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 CMC4P56277 68 aaPredicted RBP3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 MRPL51Q4U2R6 128 aaKnown RBP3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 Q86TA4 180 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 ZFAND2AQ8N6M9 145 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 TMEM75Q8N9X5 138 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 CNFNQ9BYD5 112 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
ATPAF1-203ENST00000460928 HERC1Q15751 4861 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 A8MTW9 85 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 H7BZZ5 65 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 TIMM17BO60830 172 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 CCKP06307 115 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 XCL1P47992 114 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 PDE6HQ13956 83 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 PRNTQ86SH4 94 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 Q8NAQ8 132 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 SMCR5Q8TEV8 140 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 ICOSQ9Y6W8 199 aa3.3□□□□□ -1.88
ATPAF1-203ENST00000460928 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 IGLV2-18A0A075B6J9 118 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 TRAV13-2A0A0B4J235 113 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 GNRH2O43555 120 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 INSP01308 110 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 CRIP1P50238 77 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 RHOHQ15669 191 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 Q1RN00 199 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 LYPD1Q8N2G4 141 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 Q8N377 158 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 MUC4Q99102 2169 aa3.29□□□□□ -1.88
ATPAF1-203ENST00000460928 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 KLLNB2CW77 178 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 DAD1P61803 113 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 MUC7Q8TAX7 377 aa3.28□□□□□ -1.88
ATPAF1-203ENST00000460928 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms