RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C3orf79P0CE67 100 aa9.77□□□□□ -0.85
COL7A1-203ENST00000459756 S100A2P29034 98 aa9.77□□□□□ -0.85
COL7A1-203ENST00000459756 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
COL7A1-203ENST00000459756 HIST3H2BBQ8N257 126 aa9.76□□□□□ -0.85
COL7A1-203ENST00000459756 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
COL7A1-203ENST00000459756 PFN2P35080 140 aa9.75□□□□□ -0.85
COL7A1-203ENST00000459756 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
COL7A1-203ENST00000459756 IGLV5-37A0A075B6J1 123 aa9.74□□□□□ -0.85
COL7A1-203ENST00000459756 ZNF861PO60384 105 aa9.74□□□□□ -0.85
COL7A1-203ENST00000459756 HERVK_113P61574 105 aa9.74□□□□□ -0.85
COL7A1-203ENST00000459756 SNRPEP62304 92 aaKnown RBP9.74□□□□□ -0.85
COL7A1-203ENST00000459756 COX17Q14061 63 aa9.74□□□□□ -0.85
COL7A1-203ENST00000459756 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
COL7A1-203ENST00000459756 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
COL7A1-203ENST00000459756 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
COL7A1-203ENST00000459756 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
COL7A1-203ENST00000459756 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
COL7A1-203ENST00000459756 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
COL7A1-203ENST00000459756 C20orf202A1L168 122 aa9.71□□□□□ -0.86
COL7A1-203ENST00000459756 BCE1O60756 84 aa9.71□□□□□ -0.86
COL7A1-203ENST00000459756 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.86
COL7A1-203ENST00000459756 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
COL7A1-203ENST00000459756 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.86
COL7A1-203ENST00000459756 IGLV1-50A0A075B6I6 118 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 LEPROTO15243 131 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
COL7A1-203ENST00000459756 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
COL7A1-203ENST00000459756 RPL28P46779 137 aaKnown RBP9.69□□□□□ -0.86
COL7A1-203ENST00000459756 ATOH7Q8N100 152 aa9.69□□□□□ -0.86
COL7A1-203ENST00000459756 PLEKHB2Q96CS7 222 aa9.69□□□□□ -0.86
COL7A1-203ENST00000459756 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
COL7A1-203ENST00000459756 J3QQQ9 107 aa9.68□□□□□ -0.86
COL7A1-203ENST00000459756 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
COL7A1-203ENST00000459756 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
COL7A1-203ENST00000459756 LINC00158P58513 81 aa9.67□□□□□ -0.86
COL7A1-203ENST00000459756 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
COL7A1-203ENST00000459756 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
COL7A1-203ENST00000459756 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
COL7A1-203ENST00000459756 VPREB1P12018 145 aa9.66□□□□□ -0.86
COL7A1-203ENST00000459756 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
COL7A1-203ENST00000459756 E9PLD3 99 aa9.65□□□□□ -0.86
COL7A1-203ENST00000459756 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
COL7A1-203ENST00000459756 HERV-K104P63124 156 aa9.64□□□□□ -0.87
COL7A1-203ENST00000459756 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
COL7A1-203ENST00000459756 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
COL7A1-203ENST00000459756 UBE2AP49459 152 aa9.62□□□□□ -0.87
COL7A1-203ENST00000459756 LRP2P98164 4655 aa9.61□□□□□ -0.87
COL7A1-203ENST00000459756 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
COL7A1-203ENST00000459756 NMUP48645 174 aa9.61□□□□□ -0.87
COL7A1-203ENST00000459756 KRTAP13-1Q8IUC0 172 aa9.61□□□□□ -0.87
COL7A1-203ENST00000459756 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
COL7A1-203ENST00000459756 LINC00587B1AMM8 73 aa9.6□□□□□ -0.87
COL7A1-203ENST00000459756 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
COL7A1-203ENST00000459756 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
COL7A1-203ENST00000459756 Q8NDZ9 215 aa9.6□□□□□ -0.87
COL7A1-203ENST00000459756 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
COL7A1-203ENST00000459756 DAND5Q8N907 189 aa9.59□□□□□ -0.87
COL7A1-203ENST00000459756 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
COL7A1-203ENST00000459756 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
COL7A1-203ENST00000459756 AKR1D1P51857 326 aa9.58□□□□□ -0.88
COL7A1-203ENST00000459756 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
COL7A1-203ENST00000459756 TMEM238C9JI98 176 aa9.57□□□□□ -0.88
COL7A1-203ENST00000459756 M0R378 163 aa9.56□□□□□ -0.88
COL7A1-203ENST00000459756 CRYGAP11844 174 aa9.56□□□□□ -0.88
COL7A1-203ENST00000459756 NPC2P61916 151 aa9.56□□□□□ -0.88
COL7A1-203ENST00000459756 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
COL7A1-203ENST00000459756 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
COL7A1-203ENST00000459756 PRLHP81277 87 aa9.55□□□□□ -0.88
COL7A1-203ENST00000459756 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
COL7A1-203ENST00000459756 A0A087X002 238 aa9.54□□□□□ -0.88
COL7A1-203ENST00000459756 NCR3O14931 201 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 FAM229BQ4G0N7 80 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
COL7A1-203ENST00000459756 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
COL7A1-203ENST00000459756 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
COL7A1-203ENST00000459756 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
COL7A1-203ENST00000459756 PRYO14603 147 aa9.49□□□□□ -0.89
COL7A1-203ENST00000459756 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
COL7A1-203ENST00000459756 KCNQ1DNQ9H478 68 aa9.48□□□□□ -0.89
COL7A1-203ENST00000459756 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
COL7A1-203ENST00000459756 LITAFQ99732 161 aa9.47□□□□□ -0.89
COL7A1-203ENST00000459756 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
COL7A1-203ENST00000459756 TIMM17BO60830 172 aa9.46□□□□□ -0.9
COL7A1-203ENST00000459756 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
COL7A1-203ENST00000459756 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
COL7A1-203ENST00000459756 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 EIF4EBP3O60516 100 aaPredicted RBP9.45□□□□□ -0.9
COL7A1-203ENST00000459756 TSPAN13O95857 204 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 SPRR1AP35321 89 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 S100A12P80511 92 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
COL7A1-203ENST00000459756 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
COL7A1-203ENST00000459756 LPAP08519 4548 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms