RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
NCL-206ENST00000454824 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
NCL-206ENST00000454824 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
NCL-206ENST00000454824 S100A2P29034 98 aa4.31□□□□□ -1.72
NCL-206ENST00000454824 COX17Q14061 63 aa4.31□□□□□ -1.72
NCL-206ENST00000454824 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
NCL-206ENST00000454824 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
NCL-206ENST00000454824 C20orf202A1L168 122 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 LEPROTO15243 131 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 HERV-K104P63124 156 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
NCL-206ENST00000454824 J3QQQ9 107 aa4.29□□□□□ -1.72
NCL-206ENST00000454824 PRR3P79522 188 aaKnown RBP4.29□□□□□ -1.72
NCL-206ENST00000454824 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
NCL-206ENST00000454824 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
NCL-206ENST00000454824 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
NCL-206ENST00000454824 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
NCL-206ENST00000454824 GAGE10A6NGK3 116 aa4.28□□□□□ -1.72
NCL-206ENST00000454824 C3orf79P0CE67 100 aa4.28□□□□□ -1.72
NCL-206ENST00000454824 SMIM13P0DJ93 91 aa4.28□□□□□ -1.72
NCL-206ENST00000454824 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
NCL-206ENST00000454824 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
NCL-206ENST00000454824 FAT1Q14517 4588 aa4.28□□□□□ -1.72
NCL-206ENST00000454824 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 NMUP48645 174 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 AKR1D1P51857 326 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 LINC01545Q5VT33 79 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
NCL-206ENST00000454824 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 OXTP01178 125 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
NCL-206ENST00000454824 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
NCL-206ENST00000454824 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 LINC00167Q96N53 147 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
NCL-206ENST00000454824 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
NCL-206ENST00000454824 E9PLD3 99 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 S100A12P80511 92 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 DIRC1Q969H9 104 aa4.25□□□□□ -1.73
NCL-206ENST00000454824 IGKV2-28A0A075B6P5 120 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
NCL-206ENST00000454824 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 M0R378 163 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 IGKV2D-28P01615 120 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 UBE2AP49459 152 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
NCL-206ENST00000454824 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 DAND5Q8N907 189 aa4.24□□□□□ -1.73
NCL-206ENST00000454824 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 NCR3O14931 201 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 SCGB1D1O95968 90 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 VPREB1P12018 145 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
NCL-206ENST00000454824 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.735e-27■■□□□ 14.5
NCL-206ENST00000454824 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
NCL-206ENST00000454824 A0A0J9YXY3 114 aa4.22□□□□□ -1.73
NCL-206ENST00000454824 BCE1O60756 84 aa4.22□□□□□ -1.73
NCL-206ENST00000454824 NPC2P61916 151 aa4.22□□□□□ -1.73
NCL-206ENST00000454824 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
NCL-206ENST00000454824 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
NCL-206ENST00000454824 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
NCL-206ENST00000454824 H0Y9J4 135 aa4.21□□□□□ -1.74
NCL-206ENST00000454824 ZNF861PO60384 105 aa4.21□□□□□ -1.74
NCL-206ENST00000454824 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
NCL-206ENST00000454824 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
NCL-206ENST00000454824 IGKV2D-26A0A0A0MRZ7 120 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
NCL-206ENST00000454824 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 TIMM17BO60830 172 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 DDTP30046 118 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 SPANXB1Q9NS25 103 aaPredicted RBP4.19□□□□□ -1.74
NCL-206ENST00000454824 CBY1Q9Y3M2 126 aa4.19□□□□□ -1.74
NCL-206ENST00000454824 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms