RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
CHD3-206ENST00000452447 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
CHD3-206ENST00000452447 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
CHD3-206ENST00000452447 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
CHD3-206ENST00000452447 LINC00310P59036 64 aa7.85□□□□□ -1.15
CHD3-206ENST00000452447 F8VRH5 84 aa7.84□□□□□ -1.15
CHD3-206ENST00000452447 CXCL5P42830 114 aa7.84□□□□□ -1.15
CHD3-206ENST00000452447 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
CHD3-206ENST00000452447 SCGB1D1O95968 90 aa7.84□□□□□ -1.15
CHD3-206ENST00000452447 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
CHD3-206ENST00000452447 A0A096LNJ9 63 aa7.83□□□□□ -1.16
CHD3-206ENST00000452447 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
CHD3-206ENST00000452447 H0Y9J4 135 aa7.83□□□□□ -1.16
CHD3-206ENST00000452447 NUPR1O60356 82 aa7.83□□□□□ -1.16
CHD3-206ENST00000452447 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
CHD3-206ENST00000452447 PMVKQ15126 192 aa7.82□□□□□ -1.16
CHD3-206ENST00000452447 PET117Q6UWS5 81 aa7.82□□□□□ -1.16
CHD3-206ENST00000452447 SMIM1B2RUZ4 78 aa7.81□□□□□ -1.16
CHD3-206ENST00000452447 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
CHD3-206ENST00000452447 CST9LQ9H4G1 147 aa7.81□□□□□ -1.16
CHD3-206ENST00000452447 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
CHD3-206ENST00000452447 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
CHD3-206ENST00000452447 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 PRR26Q8N8Z3 221 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 VAMP8Q9BV40 100 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 IGLV5-45A0A087WSX0 123 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 KRTDAPP60985 99 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
CHD3-206ENST00000452447 SYS1-DBNDD2H3BUS1 97 aa7.79□□□□□ -1.16
CHD3-206ENST00000452447 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
CHD3-206ENST00000452447 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
CHD3-206ENST00000452447 H0Y8G0 127 aa7.78□□□□□ -1.16
CHD3-206ENST00000452447 H3BRM9 83 aa7.78□□□□□ -1.16
CHD3-206ENST00000452447 TMEM238C9JI98 176 aa7.77□□□□□ -1.17
CHD3-206ENST00000452447 ZNF861PO60384 105 aa7.77□□□□□ -1.17
CHD3-206ENST00000452447 PLNP26678 52 aa7.77□□□□□ -1.17
CHD3-206ENST00000452447 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.17
CHD3-206ENST00000452447 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
CHD3-206ENST00000452447 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
CHD3-206ENST00000452447 K7ERU9 68 aa7.76□□□□□ -1.17
CHD3-206ENST00000452447 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
CHD3-206ENST00000452447 VPS25Q9BRG1 176 aa7.75□□□□□ -1.17
CHD3-206ENST00000452447 DPM2O94777 84 aa7.74□□□□□ -1.17
CHD3-206ENST00000452447 RPL13AP40429 203 aaKnown RBP7.74□□□□□ -1.17
CHD3-206ENST00000452447 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
CHD3-206ENST00000452447 IGKCP01834 107 aa7.73□□□□□ -1.17
CHD3-206ENST00000452447 IGLC3P0DOY3 106 aa7.73□□□□□ -1.17
CHD3-206ENST00000452447 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
CHD3-206ENST00000452447 OCIAD2Q56VL3 154 aa7.73□□□□□ -1.17
CHD3-206ENST00000452447 LINC00167Q96N53 147 aa7.73□□□□□ -1.17
CHD3-206ENST00000452447 LPAP08519 4548 aa7.73□□□□□ -1.17
CHD3-206ENST00000452447 GAGE10A6NGK3 116 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 RPL37AP8A6NKH3 93 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 HERVK_113P61574 105 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 BATFQ16520 125 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 NKAPP1Q8N9T2 125 aa7.72□□□□□ -1.17
CHD3-206ENST00000452447 A6NJY4 79 aa7.71□□□□□ -1.17
CHD3-206ENST00000452447 BCE1O60756 84 aa7.71□□□□□ -1.17
CHD3-206ENST00000452447 PFN2P35080 140 aa7.71□□□□□ -1.17
CHD3-206ENST00000452447 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.18
CHD3-206ENST00000452447 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.18
CHD3-206ENST00000452447 TMEM170BQ5T4T1 132 aa7.7□□□□□ -1.18
CHD3-206ENST00000452447 PAM16Q9Y3D7 125 aa7.7□□□□□ -1.18
CHD3-206ENST00000452447 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
CHD3-206ENST00000452447 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
CHD3-206ENST00000452447 SPATA45Q537H7 98 aa7.69□□□□□ -1.18
CHD3-206ENST00000452447 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
CHD3-206ENST00000452447 UBE2AP49459 152 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 COX17Q14061 63 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 IGKV2-28A0A075B6P5 120 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 IGKV2D-28P01615 120 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
CHD3-206ENST00000452447 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
CHD3-206ENST00000452447 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
CHD3-206ENST00000452447 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
CHD3-206ENST00000452447 CRYGAP11844 174 aa7.65□□□□□ -1.18
CHD3-206ENST00000452447 VAMP3Q15836 100 aa7.65□□□□□ -1.18
CHD3-206ENST00000452447 VPREB1P12018 145 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 PRR4Q16378 134 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 A0A087X002 238 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 ATOH7Q8N100 152 aa7.63□□□□□ -1.19
CHD3-206ENST00000452447 A0A1B0GV72 72 aa7.62□□□□□ -1.19
CHD3-206ENST00000452447 E9PLD3 99 aa7.62□□□□□ -1.19
CHD3-206ENST00000452447 TSPAN13O95857 204 aa7.62□□□□□ -1.19
CHD3-206ENST00000452447 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
CHD3-206ENST00000452447 LINC00158P58513 81 aa7.62□□□□□ -1.19
CHD3-206ENST00000452447 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
CHD3-206ENST00000452447 LEPROTO15243 131 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 NMUP48645 174 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 HINT1P49773 126 aaPredicted RBP7.61□□□□□ -1.19
CHD3-206ENST00000452447 PRLHP81277 87 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 TMEM126AQ9H061 195 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
CHD3-206ENST00000452447 A0A0U1RRA0 63 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms