RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	COX7B2	Q8TF08	81 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	LINC00208	Q96KT6	92 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	UNC79	Q9P2D8	2635 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGLV4-60	A0A075B6I1	120 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGHV3-49	A0A0A0MS15	119 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGLV5-39	A0A0G2JS06	123 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	LMO4	P61968	165 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	COX6A2	Q02221	97 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	ZAN	Q9Y493	2812 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	PLA2G1B	P04054	148 aa	Known RBP	4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	PRR3	P79522	188 aa	Known RBP	4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	CCL19	Q99731	98 aa		4.62	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGHV1-3	A0A0C4DH29	117 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	LINC00158	P58513	81 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	SMIM29	Q86T20	159 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329		Q8NAQ8	132 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	ZCCHC13	Q8WW36	166 aa	Known RBP	4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	LYPD2	Q6UXB3	125 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	C19orf73	Q9NVV2	129 aa		4.61	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGLV5-45	A0A087WSX0	123 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	SMIM1	B2RUZ4	78 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	CCL18	P55774	89 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	ZFAND2A	Q8N6M9	145 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	CCL3L1	P16619	93 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	GAFA1	Q96PS6	74 aa		4.6	□□□□□ -1.67
TRIM6-205	ENST00000445329	NDUFA4	O00483	81 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	C9orf66	Q5T8R8	295 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	C1orf134	Q5TEV5	83 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	IGLV1-51	P01701	117 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	PDE6G	P18545	87 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	LINC00242	Q5T6M2	205 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	LINC00612	Q8N6U2	182 aa		4.59	□□□□□ -1.67
TRIM6-205	ENST00000445329	NAV2	Q8IVL1	2488 aa		4.59	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.59	□□□□□ -1.68
TRIM6-205	ENST00000445329	LCE6A	A0A183	80 aa		4.59	□□□□□ -1.68
TRIM6-205	ENST00000445329	SPINK7	P58062	85 aa		4.59	□□□□□ -1.68
TRIM6-205	ENST00000445329	MUC7	Q8TAX7	377 aa		4.59	□□□□□ -1.68
TRIM6-205	ENST00000445329	ABCA2	Q9BZC7	2435 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV3-53	P01767	116 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	C10orf25	Q5T742	122 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	LENEP	Q9Y5L5	61 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	WNK2	Q9Y3S1	2297 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	NDUFB1	O75438	58 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	CUBN	O60494	3623 aa		4.58	□□□□□ -1.68
TRIM6-205	ENST00000445329	OTOG	Q6ZRI0	2925 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329		F8W735	103 aa	Predicted RBP	4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	DEFB1	P60022	68 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	BAHCC1	Q9P281	2608 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	TEX15	Q9BXT5	2789 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV4-30-2	A0A087WSY4	118 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329		A0A096LNT2	108 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	ELOF1	P60002	83 aa	Known RBP	4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	CCDC168	Q8NDH2	2452 aa		4.57	□□□□□ -1.68
TRIM6-205	ENST00000445329	TRBV6-4	A0A1B0GX49	114 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	INAFM1	C9JVW0	142 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	KRTAP1-3	Q8IUG1	177 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	LINC00467	Q9BRT7	94 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	WFDC10A	Q9H1F0	79 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	TOMM7	Q9P0U1	55 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	KAAG1	Q9UBP8	84 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	FLNB	O75369	2602 aa	Known RBP	4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	ITPR3	Q14573	2671 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	SETX	Q7Z333	2677 aa	Known RBP	4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	TRGV2	A0A075B6R0	118 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV3-73	A0A0B4J1V6	119 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV4-61	A0A0C4DH41	118 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	LY6G6D	O95868	133 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	DEFB113	Q30KQ7	82 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	CSAG1	Q6PB30	78 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	ST20-AS1	Q8NBB2	130 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	ZFP36	P26651	326 aa	Known RBP	4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329		Q9BRP9	147 aa		4.56	□□□□□ -1.68
TRIM6-205	ENST00000445329	ANK3	Q12955	4377 aa	Known RBP	4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	CR1	P17927	2039 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	MAPK1IP1L	Q8NDC0	245 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	CHCHD7	Q9BUK0	85 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGHV3OR16-12	A0A075B7B8	117 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	ETDC	A0A1B0GVM5	59 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	MAP6D1	Q9H9H5	199 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329		X6R8D5	127 aa		4.55	□□□□□ -1.68
TRIM6-205	ENST00000445329	NOTCH2	Q04721	2471 aa		4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	MXRA5	Q9NR99	2828 aa		4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	DNAJC9-AS1	A6NH13	148 aa		4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	ZNF702P	Q9H963	129 aa		4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	MYO9A	B2RTY4	2548 aa		4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	FLNA	P21333	2647 aa	Known RBP	4.54	□□□□□ -1.68
TRIM6-205	ENST00000445329	IGLV11-55	A0A075B6I3	123 aa		4.53	□□□□□ -1.68
TRIM6-205	ENST00000445329	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.53	□□□□□ -1.68
TRIM6-205	ENST00000445329	SPAG11B	Q08648	103 aa		4.53	□□□□□ -1.68
TRIM6-205	ENST00000445329	SPAG11A	Q6PDA7	123 aa		4.53	□□□□□ -1.68
TRIM6-205	ENST00000445329		A0A1W2PNM2	257 aa		4.53	□□□□□ -1.68
TRIM6-205	ENST00000445329	CYSRT1	A8MQ03	144 aa		4.52	□□□□□ -1.69
TRIM6-205	ENST00000445329	IGHV4-31	P0DP07	118 aa		4.52	□□□□□ -1.69
TRIM6-205	ENST00000445329	ACAN	P16112	2415 aa		4.52	□□□□□ -1.69
TRIM6-205	ENST00000445329	DSCR9	P59020	149 aa		4.52	□□□□□ -1.69
TRIM6-205	ENST00000445329	ASB16-AS1	Q495Z4	193 aa		4.52	□□□□□ -1.69
TRIM6-205	ENST00000445329	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.52	□□□□□ -1.69	5e-6	■■■■□ 23.8
TRIM6-205	ENST00000445329		Q6ZR54	194 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms