RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SMCR5Q8TEV8 140 aa11.38□□□□□ -0.59
TCOF1-206ENST00000445265 VCANP13611 3396 aa11.38□□□□□ -0.59
TCOF1-206ENST00000445265 PRYO14603 147 aa11.38□□□□□ -0.59
TCOF1-206ENST00000445265 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
TCOF1-206ENST00000445265 BCE1O60756 84 aa11.37□□□□□ -0.59
TCOF1-206ENST00000445265 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
TCOF1-206ENST00000445265 H3BNG1 76 aa11.37□□□□□ -0.59
TCOF1-206ENST00000445265 SPATA3Q8NHX4 192 aa11.37□□□□□ -0.59
TCOF1-206ENST00000445265 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
TCOF1-206ENST00000445265 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 Q6ZQT0 140 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 Q8NAQ8 132 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-206ENST00000445265 LINC01556Q5JQF7 62 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 WFDC13Q8IUB5 93 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 REG3GQ6UW15 175 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 LINC01600Q96MT4 127 aa11.35□□□□□ -0.59
TCOF1-206ENST00000445265 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
TCOF1-206ENST00000445265 GVQW2A0A096LPI5 108 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-206ENST00000445265 ELOF1P60002 83 aaKnown RBP11.33□□□□□ -0.6
TCOF1-206ENST00000445265 MRPL55Q7Z7F7 128 aaKnown RBP11.32□□□□□ -0.6
TCOF1-206ENST00000445265 CENPEQ02224 2701 aa11.32□□□□□ -0.6
TCOF1-206ENST00000445265 ESRGQ1W209 222 aa11.32□□□□□ -0.6
TCOF1-206ENST00000445265 TMEM254Q8TBM7 123 aa11.31□□□□□ -0.6
TCOF1-206ENST00000445265 AKAP13Q12802 2813 aa11.31□□□□□ -0.6
TCOF1-206ENST00000445265 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
TCOF1-206ENST00000445265 RPS28P62857 69 aaKnown RBP11.29□□□□□ -0.6
TCOF1-206ENST00000445265 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 HRCT1Q6UXD1 115 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
TCOF1-206ENST00000445265 FLNAP21333 2647 aaKnown RBP11.27□□□□□ -0.61
TCOF1-206ENST00000445265 IGKV4-1P06312 121 aa11.26□□□□□ -0.61
TCOF1-206ENST00000445265 V9GYY9 64 aa11.26□□□□□ -0.61
TCOF1-206ENST00000445265 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
TCOF1-206ENST00000445265 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
TCOF1-206ENST00000445265 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
TCOF1-206ENST00000445265 A0A1B0GW54 56 aa11.24□□□□□ -0.61
TCOF1-206ENST00000445265 CELSR3Q9NYQ7 3312 aa11.24□□□□□ -0.61
TCOF1-206ENST00000445265 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-206ENST00000445265 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
TCOF1-206ENST00000445265 Q8N9L7 120 aa11.23□□□□□ -0.61
TCOF1-206ENST00000445265 PRR4Q16378 134 aa11.22□□□□□ -0.61
TCOF1-206ENST00000445265 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
TCOF1-206ENST00000445265 VPREB1P12018 145 aa11.22□□□□□ -0.61
TCOF1-206ENST00000445265 KRTAP1-3Q8IUG1 177 aa11.21□□□□□ -0.61
TCOF1-206ENST00000445265 LINC00167Q96N53 147 aa11.2□□□□□ -0.62
TCOF1-206ENST00000445265 A0A087WSZ3 146 aa11.2□□□□□ -0.62
TCOF1-206ENST00000445265 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
TCOF1-206ENST00000445265 Q9BRP9 147 aa11.2□□□□□ -0.62
TCOF1-206ENST00000445265 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
TCOF1-206ENST00000445265 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
TCOF1-206ENST00000445265 Q6ZRX8 168 aa11.17□□□□□ -0.62
TCOF1-206ENST00000445265 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
TCOF1-206ENST00000445265 HCG22E2RYF7 251 aa11.16□□□□□ -0.62
TCOF1-206ENST00000445265 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
TCOF1-206ENST00000445265 PRLHP81277 87 aa11.15□□□□□ -0.62
TCOF1-206ENST00000445265 Q6ZRP5 223 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 CASC2Q6XLA1 102 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 A0A0U1RQV1 116 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 Q8NBF4 154 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 HECTD1Q9ULT8 2610 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 F8P00451 2351 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 M0R2N4 97 aa11.14□□□□□ -0.63
TCOF1-206ENST00000445265 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
TCOF1-206ENST00000445265 FRYLO94915 3013 aa11.13□□□□□ -0.63
TCOF1-206ENST00000445265 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
TCOF1-206ENST00000445265 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
TCOF1-206ENST00000445265 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
TCOF1-206ENST00000445265 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
TCOF1-206ENST00000445265 REV3LO60673 3130 aa11.11□□□□□ -0.63
TCOF1-206ENST00000445265 OBSCN-AS1Q96MR7 158 aa11.11□□□□□ -0.63
TCOF1-206ENST00000445265 TM2D3Q9BRN9 247 aa11.1□□□□□ -0.63
TCOF1-206ENST00000445265 DNAH10OSP0CZ25 163 aa11.1□□□□□ -0.63
TCOF1-206ENST00000445265 KRTAP1-1Q07627 177 aa11.1□□□□□ -0.63
TCOF1-206ENST00000445265 DEFB116Q30KQ4 102 aa11.1□□□□□ -0.63
TCOF1-206ENST00000445265 SPINK6Q6UWN8 80 aa11.09□□□□□ -0.63
TCOF1-206ENST00000445265 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
TCOF1-206ENST00000445265 MAP1AP78559 2803 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-206ENST00000445265 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
TCOF1-206ENST00000445265 TRBV7-4A0A0J9YYF1 115 aa11.06□□□□□ -0.64
TCOF1-206ENST00000445265 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
TCOF1-206ENST00000445265 SPTSSBQ8NFR3 76 aa11.06□□□□□ -0.64
TCOF1-206ENST00000445265 H0Y9P7 68 aa11.05□□□□□ -0.64
TCOF1-206ENST00000445265 CFAP46Q8IYW2 2715 aa11.05□□□□□ -0.64
TCOF1-206ENST00000445265 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
TCOF1-206ENST00000445265 hDV103S1A0JD37 113 aa11.04□□□□□ -0.64
TCOF1-206ENST00000445265 KRTAP24-1Q3LI83 254 aa11.04□□□□□ -0.64
TCOF1-206ENST00000445265 ST20-AS1Q8NBB2 130 aa11.04□□□□□ -0.64
TCOF1-206ENST00000445265 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
TCOF1-206ENST00000445265 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
TCOF1-206ENST00000445265 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.64
TCOF1-206ENST00000445265 CR1P17927 2039 aa11.01□□□□□ -0.65
TCOF1-206ENST00000445265 ATRQ13535 2644 aa11.01□□□□□ -0.65
TCOF1-206ENST00000445265 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
TCOF1-206ENST00000445265 KLKP1Q107X0 134 aa11.01□□□□□ -0.65
TCOF1-206ENST00000445265 SPEGQ15772 3267 aa11□□□□□ -0.65
TCOF1-206ENST00000445265 C4orf26Q17RF5 130 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms