RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 WFDC2Q14508 124 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 OTOGLQ3ZCN5 2332 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 TMEM170BQ5T4T1 132 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 Q86TA4 180 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 C5orf56Q8N8D9 126 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 TENM4Q6N022 2769 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 MYO18BQ8IUG5 2567 aa2.04□□□□□ -2.08
TM9SF3-202ENST00000443638 ASXL3Q9C0F0 2248 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 ANKRD36CQ5JPF3 1778 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 PIEZO2Q9H5I5 2752 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 LOC730098B7Z3J9 87 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 J3QKU1 62 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 PDCD5O14737 125 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 IGLC2P0DOY2 106 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 IGLC3P0DOY3 106 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 BVES-AS1Q5T3Y7 98 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 FAM223AQ8IWN6 122 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 V9GYV3 84 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 MED12Q93074 2177 aa2.03□□□□□ -2.08
TM9SF3-202ENST00000443638 DSPP15924 2871 aaKnown RBP2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 F2Z2F3 143 aa2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 R4GMQ9 66 aa2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 IGF2RP11717 2491 aa2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 CNOT1A5YKK6 2376 aaKnown RBP2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
TM9SF3-202ENST00000443638 MYH4Q9Y623 1939 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 DMXL2Q8TDJ6 3036 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 ZNF815PA8K554 130 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 ACYP1P07311 99 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 SAA2P0DJI9 122 aaPredicted RBP2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 SPTBP11277 2137 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 PI4KAP42356 2102 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 LINC00208Q96KT6 92 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 LINC01600Q96MT4 127 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 AMELXQ99217 191 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 TEX15Q9BXT5 2789 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 DLG5Q8TDM6 1919 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 IGSF10Q6WRI0 2623 aa2.01□□□□□ -2.09
TM9SF3-202ENST00000443638 LOC285556D6RIA3 1793 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 SIPA1L3O60292 1781 aaPredicted RBP2□□□□□ -2.09
TM9SF3-202ENST00000443638 AKAP13Q12802 2813 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 UBR5O95071 2799 aaPredicted RBP2□□□□□ -2.09
TM9SF3-202ENST00000443638 KALRNO60229 2985 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 H3BUT2 72 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 CCL18P55774 89 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 Q5BKY6 102 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 LINC00643Q86TS7 51 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 TMEM14BQ9NUH8 114 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 ARL2-SNX15V9GYD0 113 aa2□□□□□ -2.09
TM9SF3-202ENST00000443638 COL12A1Q99715 3063 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 FXYD1O00168 92 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 CFDP00746 253 aaPredicted RBP1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 EFNA4P52798 201 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 CFAP126Q5VTH2 177 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 DEFB119Q8N690 84 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 ITPR1Q14643 2758 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 FREM2Q5SZK8 3169 aa1.99□□□□□ -2.09
TM9SF3-202ENST00000443638 DOCK11Q5JSL3 2073 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 CFAP46Q8IYW2 2715 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 FBN2P35556 2912 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 FBN3Q75N90 2809 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 C2CD3Q4AC94 2353 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 A0A087WTM6 91 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 F8VRH5 84 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 MYO9AB2RTY4 2548 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 CEP295Q9C0D2 2601 aa1.98□□□□□ -2.09
TM9SF3-202ENST00000443638 CREBBPQ92793 2442 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 SORL1Q92673 2214 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 FAM223BA6NKX1 122 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 F8WEM9 126 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 HMGN2P05204 90 aaKnown RBP1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 C18orf32Q8TCD1 76 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 CCL19Q99731 98 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 A0A1B0GUL6 1792 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 SPTAN1Q13813 2472 aaKnown RBP1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 SPTA1P02549 2419 aa1.97□□□□□ -2.09
TM9SF3-202ENST00000443638 PTPRQQ9UMZ3 2332 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 DOPEY2Q9Y3R5 2298 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 C10orf142B7Z368 130 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 M0R135 149 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 CAV3P56539 151 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 HMGN3Q15651 99 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 Q6ZQY7 126 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 BAGE3Q86Y29 109 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 BAGE2Q86Y30 109 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 WFDC6Q9BQY6 131 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 POLQO75417 2590 aa1.96□□□□□ -2.1
TM9SF3-202ENST00000443638 NAV3Q8IVL0 2385 aa1.95□□□□□ -2.1
TM9SF3-202ENST00000443638 PDCD11Q14690 1871 aaKnown RBP1.95□□□□□ -2.1
TM9SF3-202ENST00000443638 CTXND1A0A1B0GTU2 59 aa1.95□□□□□ -2.1
TM9SF3-202ENST00000443638 UQCR11O14957 56 aa1.95□□□□□ -2.1
TM9SF3-202ENST00000443638 ASCC3Q8N3C0 2202 aaKnown RBP1.95□□□□□ -2.1
TM9SF3-202ENST00000443638 RELNP78509 3460 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms