RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
CDKN3-204ENST00000442975 UBE2AP49459 152 aa12.63□□□□□ -0.39
CDKN3-204ENST00000442975 MEIG1Q5JSS6 88 aa12.63□□□□□ -0.39
CDKN3-204ENST00000442975 Q8NDZ9 215 aa12.62□□□□□ -0.39
CDKN3-204ENST00000442975 LRP2P98164 4655 aa12.61□□□□□ -0.39
CDKN3-204ENST00000442975 ATP6V1G1O75348 118 aa12.61□□□□□ -0.39
CDKN3-204ENST00000442975 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
CDKN3-204ENST00000442975 PLNP26678 52 aa12.6□□□□□ -0.39
CDKN3-204ENST00000442975 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
CDKN3-204ENST00000442975 PMCHL2Q9BQD1 86 aa12.6□□□□□ -0.39
CDKN3-204ENST00000442975 NDUFA12Q9UI09 145 aa12.6□□□□□ -0.39
CDKN3-204ENST00000442975 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
CDKN3-204ENST00000442975 HERV-K104P63124 156 aa12.58□□□□□ -0.4
CDKN3-204ENST00000442975 DPM2O94777 84 aa12.57□□□□□ -0.4
CDKN3-204ENST00000442975 TSPEAR-AS2P59090 65 aa12.56□□□□□ -0.4
CDKN3-204ENST00000442975 PRLHP81277 87 aa12.56□□□□□ -0.4
CDKN3-204ENST00000442975 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
CDKN3-204ENST00000442975 TMEM126AQ9H061 195 aa12.56□□□□□ -0.4
CDKN3-204ENST00000442975 MYMXA0A1B0GTQ4 84 aa12.55□□□□□ -0.4
CDKN3-204ENST00000442975 HERVK_113P61574 105 aa12.55□□□□□ -0.4
CDKN3-204ENST00000442975 FAM19A1Q7Z5A9 133 aa12.55□□□□□ -0.4
CDKN3-204ENST00000442975 KRTAP13-1Q8IUC0 172 aa12.55□□□□□ -0.4
CDKN3-204ENST00000442975 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
CDKN3-204ENST00000442975 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
CDKN3-204ENST00000442975 MAP1LC3CQ9BXW4 147 aa12.54□□□□□ -0.4
CDKN3-204ENST00000442975 LEPROTO15243 131 aa12.53□□□□□ -0.4
CDKN3-204ENST00000442975 IGKCP01834 107 aa12.53□□□□□ -0.4
CDKN3-204ENST00000442975 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 M0R378 163 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
CDKN3-204ENST00000442975 A0A087X002 238 aa12.51□□□□□ -0.41
CDKN3-204ENST00000442975 NCR3O14931 201 aa12.51□□□□□ -0.41
CDKN3-204ENST00000442975 J3QQQ9 107 aa12.5□□□□□ -0.41
CDKN3-204ENST00000442975 CRYGAP11844 174 aa12.5□□□□□ -0.41
CDKN3-204ENST00000442975 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
CDKN3-204ENST00000442975 ANAPC11Q9NYG5 84 aa12.5□□□□□ -0.41
CDKN3-204ENST00000442975 DAND5Q8N907 189 aa12.49□□□□□ -0.41
CDKN3-204ENST00000442975 TYMSOSQ8TAI1 123 aa12.46□□□□□ -0.41
CDKN3-204ENST00000442975 HIGD2AQ9BW72 106 aa12.46□□□□□ -0.41
CDKN3-204ENST00000442975 NMUP48645 174 aa12.45□□□□□ -0.42
CDKN3-204ENST00000442975 SYS1-DBNDD2H3BUS1 97 aa12.44□□□□□ -0.42
CDKN3-204ENST00000442975 MIEN1Q9BRT3 115 aa12.43□□□□□ -0.42
CDKN3-204ENST00000442975 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
CDKN3-204ENST00000442975 PRYO14603 147 aa12.42□□□□□ -0.42
CDKN3-204ENST00000442975 TSPAN13O95857 204 aa12.42□□□□□ -0.42
CDKN3-204ENST00000442975 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
CDKN3-204ENST00000442975 TRBV10-3A0A0K0K1G6 114 aa12.4□□□□□ -0.42
CDKN3-204ENST00000442975 KRTAP13-2Q52LG2 175 aa12.4□□□□□ -0.42
CDKN3-204ENST00000442975 LPAP08519 4548 aa12.4□□□□□ -0.43
CDKN3-204ENST00000442975 E9PLD3 99 aa12.39□□□□□ -0.43
CDKN3-204ENST00000442975 PRR4Q16378 134 aa12.38□□□□□ -0.43
CDKN3-204ENST00000442975 ETDCA0A1B0GVM5 59 aa12.37□□□□□ -0.43
CDKN3-204ENST00000442975 NPC2P61916 151 aa12.37□□□□□ -0.43
CDKN3-204ENST00000442975 S100A12P80511 92 aa12.37□□□□□ -0.43
CDKN3-204ENST00000442975 KCNQ1DNQ9H478 68 aa12.37□□□□□ -0.43
CDKN3-204ENST00000442975 RNF213Q63HN8 5207 aa12.36□□□□□ -0.43
CDKN3-204ENST00000442975 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
CDKN3-204ENST00000442975 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
CDKN3-204ENST00000442975 PET117Q6UWS5 81 aa12.36□□□□□ -0.43
CDKN3-204ENST00000442975 LINC00337Q8N6G1 96 aa12.35□□□□□ -0.43
CDKN3-204ENST00000442975 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
CDKN3-204ENST00000442975 DDTP30046 118 aa12.34□□□□□ -0.43
CDKN3-204ENST00000442975 SPRR1AP35321 89 aa12.34□□□□□ -0.43
CDKN3-204ENST00000442975 KRTDAPP60985 99 aa12.34□□□□□ -0.43
CDKN3-204ENST00000442975 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.44
CDKN3-204ENST00000442975 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
CDKN3-204ENST00000442975 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.44
CDKN3-204ENST00000442975 TRBV10-2A0A0K0K1G8 114 aa12.32□□□□□ -0.44
CDKN3-204ENST00000442975 LINC00304Q8N9R0 145 aa12.32□□□□□ -0.44
CDKN3-204ENST00000442975 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
CDKN3-204ENST00000442975 ZNF706Q9Y5V0 76 aaPredicted RBP12.32□□□□□ -0.44
CDKN3-204ENST00000442975 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
CDKN3-204ENST00000442975 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
CDKN3-204ENST00000442975 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
CDKN3-204ENST00000442975 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
CDKN3-204ENST00000442975 KRTAP4-16G5E9R7 235 aaPredicted RBP12.29□□□□□ -0.44
CDKN3-204ENST00000442975 EIF4EBP3O60516 100 aaPredicted RBP12.29□□□□□ -0.44
CDKN3-204ENST00000442975 NDUFC2O95298 119 aa12.29□□□□□ -0.44
CDKN3-204ENST00000442975 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
CDKN3-204ENST00000442975 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
CDKN3-204ENST00000442975 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
CDKN3-204ENST00000442975 C20orf202A1L168 122 aa12.27□□□□□ -0.45
CDKN3-204ENST00000442975 B5MCH6 92 aa12.26□□□□□ -0.45
CDKN3-204ENST00000442975 TTTY13Q9BZ97 58 aa12.26□□□□□ -0.45
CDKN3-204ENST00000442975 PPDPFQ9H3Y8 114 aa12.26□□□□□ -0.45
CDKN3-204ENST00000442975 TRAV23DV6A0A075B6W5 121 aa12.25□□□□□ -0.45
CDKN3-204ENST00000442975 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
CDKN3-204ENST00000442975 LITAFQ99732 161 aa12.24□□□□□ -0.45
CDKN3-204ENST00000442975 TIMM17BO60830 172 aa12.23□□□□□ -0.45
CDKN3-204ENST00000442975 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms