RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
PDGFB-203ENST00000440375 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
PDGFB-203ENST00000440375 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
PDGFB-203ENST00000440375 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 H0Y8G0 127 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 FABP4P15090 132 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 Q8NDZ9 215 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
PDGFB-203ENST00000440375 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
PDGFB-203ENST00000440375 CHTOPQ9Y3Y2 248 aaKnown RBP7.05□□□□□ -1.28
PDGFB-203ENST00000440375 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
PDGFB-203ENST00000440375 VPREB1P12018 145 aa7.04□□□□□ -1.28
PDGFB-203ENST00000440375 PRR4Q16378 134 aa7.04□□□□□ -1.28
PDGFB-203ENST00000440375 TSPAN13O95857 204 aa7.03□□□□□ -1.28
PDGFB-203ENST00000440375 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
PDGFB-203ENST00000440375 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
PDGFB-203ENST00000440375 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
PDGFB-203ENST00000440375 UBE2AP49459 152 aa7.02□□□□□ -1.29
PDGFB-203ENST00000440375 PRLHP81277 87 aa7.02□□□□□ -1.29
PDGFB-203ENST00000440375 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
PDGFB-203ENST00000440375 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
PDGFB-203ENST00000440375 CRYGAP11844 174 aa7□□□□□ -1.29
PDGFB-203ENST00000440375 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
PDGFB-203ENST00000440375 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
PDGFB-203ENST00000440375 TMEM126AQ9H061 195 aa7□□□□□ -1.29
PDGFB-203ENST00000440375 M0R378 163 aa6.99□□□□□ -1.29
PDGFB-203ENST00000440375 COX17Q14061 63 aa6.99□□□□□ -1.29
PDGFB-203ENST00000440375 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
PDGFB-203ENST00000440375 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
PDGFB-203ENST00000440375 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
PDGFB-203ENST00000440375 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
PDGFB-203ENST00000440375 MUC2Q02817 5179 aa6.96□□□□□ -1.29
PDGFB-203ENST00000440375 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.3
PDGFB-203ENST00000440375 LINC00158P58513 81 aa6.96□□□□□ -1.3
PDGFB-203ENST00000440375 RPL24P83731 157 aaKnown RBP6.96□□□□□ -1.3
PDGFB-203ENST00000440375 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
PDGFB-203ENST00000440375 DPM2O94777 84 aa6.95□□□□□ -1.3
PDGFB-203ENST00000440375 PLNP26678 52 aa6.95□□□□□ -1.3
PDGFB-203ENST00000440375 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
PDGFB-203ENST00000440375 IGKCP01834 107 aa6.94□□□□□ -1.3
PDGFB-203ENST00000440375 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
PDGFB-203ENST00000440375 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
PDGFB-203ENST00000440375 KRTDAPP60985 99 aa6.94□□□□□ -1.3
PDGFB-203ENST00000440375 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
PDGFB-203ENST00000440375 S100A6P06703 90 aa6.93□□□□□ -1.3
PDGFB-203ENST00000440375 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
PDGFB-203ENST00000440375 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
PDGFB-203ENST00000440375 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
PDGFB-203ENST00000440375 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
PDGFB-203ENST00000440375 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
PDGFB-203ENST00000440375 LINC01545Q5VT33 79 aa6.92□□□□□ -1.3
PDGFB-203ENST00000440375 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
PDGFB-203ENST00000440375 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
PDGFB-203ENST00000440375 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 NCR3O14931 201 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 S100A2P29034 98 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
PDGFB-203ENST00000440375 LEPROTO15243 131 aa6.9□□□□□ -1.3
PDGFB-203ENST00000440375 HERVK_113P61574 105 aa6.9□□□□□ -1.3
PDGFB-203ENST00000440375 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
PDGFB-203ENST00000440375 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
PDGFB-203ENST00000440375 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
PDGFB-203ENST00000440375 J3QQQ9 107 aa6.88□□□□□ -1.31
PDGFB-203ENST00000440375 PRYO14603 147 aa6.88□□□□□ -1.31
PDGFB-203ENST00000440375 HERV-K104P63124 156 aa6.88□□□□□ -1.31
PDGFB-203ENST00000440375 TRBV10-3A0A0K0K1G6 114 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 C20orf202A1L168 122 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 SPRR1AP35321 89 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 ATOH7Q8N100 152 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 DAND5Q8N907 189 aa6.87□□□□□ -1.31
PDGFB-203ENST00000440375 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
PDGFB-203ENST00000440375 E9PLD3 99 aa6.86□□□□□ -1.31
PDGFB-203ENST00000440375 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
PDGFB-203ENST00000440375 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
PDGFB-203ENST00000440375 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
PDGFB-203ENST00000440375 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
PDGFB-203ENST00000440375 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
PDGFB-203ENST00000440375 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
PDGFB-203ENST00000440375 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
PDGFB-203ENST00000440375 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
PDGFB-203ENST00000440375 NMUP48645 174 aa6.83□□□□□ -1.32
PDGFB-203ENST00000440375 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
PDGFB-203ENST00000440375 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
PDGFB-203ENST00000440375 LINC00587B1AMM8 73 aa6.82□□□□□ -1.32
PDGFB-203ENST00000440375 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
PDGFB-203ENST00000440375 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
PDGFB-203ENST00000440375 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
PDGFB-203ENST00000440375 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
PDGFB-203ENST00000440375 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
PDGFB-203ENST00000440375 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
PDGFB-203ENST00000440375 Q8NBF4 154 aa6.81□□□□□ -1.32
PDGFB-203ENST00000440375 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
PDGFB-203ENST00000440375 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms