RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 Q8IZM0 81 aa12.42□□□□□ -0.42
KCNC4-204ENST00000438661 MIFP14174 115 aa12.4□□□□□ -0.42
KCNC4-204ENST00000438661 Q8N9L7 120 aa12.4□□□□□ -0.42
KCNC4-204ENST00000438661 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
KCNC4-204ENST00000438661 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
KCNC4-204ENST00000438661 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
KCNC4-204ENST00000438661 GIG44P09565 113 aaPredicted RBP12.37□□□□□ -0.43
KCNC4-204ENST00000438661 GYPEP15421 78 aa12.37□□□□□ -0.43
KCNC4-204ENST00000438661 LOC110117498A0A087WWA1 95 aa12.36□□□□□ -0.43
KCNC4-204ENST00000438661 DAD1P61803 113 aa12.36□□□□□ -0.43
KCNC4-204ENST00000438661 NREPQ16612 68 aa12.36□□□□□ -0.43
KCNC4-204ENST00000438661 C6orf223Q8N319 242 aa12.35□□□□□ -0.43
KCNC4-204ENST00000438661 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
KCNC4-204ENST00000438661 BCE1O60756 84 aa12.34□□□□□ -0.43
KCNC4-204ENST00000438661 TMEM254Q8TBM7 123 aa12.34□□□□□ -0.43
KCNC4-204ENST00000438661 TRBV7-4A0A0J9YYF1 115 aa12.33□□□□□ -0.44
KCNC4-204ENST00000438661 BPY2O14599 106 aa12.33□□□□□ -0.44
KCNC4-204ENST00000438661 CXCL6P80162 114 aa12.33□□□□□ -0.44
KCNC4-204ENST00000438661 KIAA0087Q14695 138 aa12.33□□□□□ -0.44
KCNC4-204ENST00000438661 CCL24O00175 119 aa12.32□□□□□ -0.44
KCNC4-204ENST00000438661 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
KCNC4-204ENST00000438661 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
KCNC4-204ENST00000438661 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
KCNC4-204ENST00000438661 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
KCNC4-204ENST00000438661 ANGP03950 147 aaKnown RBP12.31□□□□□ -0.44
KCNC4-204ENST00000438661 DEFB113Q30KQ7 82 aa12.31□□□□□ -0.44
KCNC4-204ENST00000438661 C1orf195Q5TG92 126 aa12.31□□□□□ -0.44
KCNC4-204ENST00000438661 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
KCNC4-204ENST00000438661 NDUFC1O43677 76 aa12.3□□□□□ -0.44
KCNC4-204ENST00000438661 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
KCNC4-204ENST00000438661 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
KCNC4-204ENST00000438661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.29□□□□□ -0.44
KCNC4-204ENST00000438661 MTORP42345 2549 aa12.28□□□□□ -0.44
KCNC4-204ENST00000438661 COX17Q14061 63 aa12.28□□□□□ -0.44
KCNC4-204ENST00000438661 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
KCNC4-204ENST00000438661 UBR5O95071 2799 aaPredicted RBP12.27□□□□□ -0.44
KCNC4-204ENST00000438661 DNAJC9-AS1A6NH13 148 aa12.27□□□□□ -0.45
KCNC4-204ENST00000438661 CD164L2Q6UWJ8 174 aa12.26□□□□□ -0.45
KCNC4-204ENST00000438661 BBC3Q96PG8 261 aaPredicted RBP12.25□□□□□ -0.45
KCNC4-204ENST00000438661 V9GYY9 64 aa12.25□□□□□ -0.45
KCNC4-204ENST00000438661 PDE6GP18545 87 aa12.24□□□□□ -0.45
KCNC4-204ENST00000438661 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
KCNC4-204ENST00000438661 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
KCNC4-204ENST00000438661 REG3AQ06141 175 aa12.23□□□□□ -0.45
KCNC4-204ENST00000438661 HIGD2AQ9BW72 106 aa12.23□□□□□ -0.45
KCNC4-204ENST00000438661 FUSP35637 526 aaKnown RBP eCLIP12.23□□□□□ -0.45
KCNC4-204ENST00000438661 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
KCNC4-204ENST00000438661 FLNAP21333 2647 aaKnown RBP12.23□□□□□ -0.45
KCNC4-204ENST00000438661 F8WDY8 70 aa12.22□□□□□ -0.45
KCNC4-204ENST00000438661 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
KCNC4-204ENST00000438661 KRTAP1-3Q8IUG1 177 aa12.22□□□□□ -0.45
KCNC4-204ENST00000438661 CYSRT1A8MQ03 144 aa12.21□□□□□ -0.45
KCNC4-204ENST00000438661 PRYO14603 147 aa12.21□□□□□ -0.45
KCNC4-204ENST00000438661 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.45
KCNC4-204ENST00000438661 CSNK1G2-AS1Q8NCQ2 148 aa12.21□□□□□ -0.45
KCNC4-204ENST00000438661 DIRC1Q969H9 104 aa12.21□□□□□ -0.45
KCNC4-204ENST00000438661 C3orf84H3BNL1 204 aa12.21□□□□□ -0.46
KCNC4-204ENST00000438661 IGLV6-57P01721 117 aa12.2□□□□□ -0.46
KCNC4-204ENST00000438661 SEC61GP60059 68 aa12.2□□□□□ -0.46
KCNC4-204ENST00000438661 DEFB4AO15263 64 aa12.19□□□□□ -0.46
KCNC4-204ENST00000438661 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
KCNC4-204ENST00000438661 ESRGQ1W209 222 aa12.18□□□□□ -0.46
KCNC4-204ENST00000438661 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
KCNC4-204ENST00000438661 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
KCNC4-204ENST00000438661 ACANP16112 2415 aa12.18□□□□□ -0.46
KCNC4-204ENST00000438661 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
KCNC4-204ENST00000438661 COX7BP24311 80 aa12.17□□□□□ -0.46
KCNC4-204ENST00000438661 PRB2P02812 416 aaPredicted RBP12.15□□□□□ -0.46
KCNC4-204ENST00000438661 KLK12Q9UKR0 248 aa12.15□□□□□ -0.46
KCNC4-204ENST00000438661 IGKV4-1P06312 121 aa12.15□□□□□ -0.47
KCNC4-204ENST00000438661 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.47
KCNC4-204ENST00000438661 PRO0255Q9UI72 69 aa12.15□□□□□ -0.47
KCNC4-204ENST00000438661 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
KCNC4-204ENST00000438661 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
KCNC4-204ENST00000438661 DEFB105AQ8NG35 78 aa12.13□□□□□ -0.47
KCNC4-204ENST00000438661 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
KCNC4-204ENST00000438661 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
KCNC4-204ENST00000438661 Q6ZTC4 211 aa12.12□□□□□ -0.47
KCNC4-204ENST00000438661 PRR4Q16378 134 aa12.09□□□□□ -0.47
KCNC4-204ENST00000438661 HTN3P15516 51 aa12.09□□□□□ -0.47
KCNC4-204ENST00000438661 HIGD2BQ4VC39 106 aa12.08□□□□□ -0.48
KCNC4-204ENST00000438661 PSPHP1O15172 72 aa12.07□□□□□ -0.48
KCNC4-204ENST00000438661 ERC2-IT1O76042 136 aa12.07□□□□□ -0.48
KCNC4-204ENST00000438661 ELOF1P60002 83 aaKnown RBP12.06□□□□□ -0.48
KCNC4-204ENST00000438661 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
KCNC4-204ENST00000438661 C6orf48Q9UBA6 75 aa12.06□□□□□ -0.48
KCNC4-204ENST00000438661 H3BQ85 93 aa12.06□□□□□ -0.48
KCNC4-204ENST00000438661 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
KCNC4-204ENST00000438661 A0A0J9YWU9 116 aa12.04□□□□□ -0.48
KCNC4-204ENST00000438661 IGHV4-30-4P0DP06 118 aa12.04□□□□□ -0.48
KCNC4-204ENST00000438661 F8P00451 2351 aa12.04□□□□□ -0.48
KCNC4-204ENST00000438661 UNC79Q9P2D8 2635 aa12.04□□□□□ -0.48
KCNC4-204ENST00000438661 C1orf64Q8NEQ6 169 aa12□□□□□ -0.49
KCNC4-204ENST00000438661 VWFP04275 2813 aa12□□□□□ -0.49
KCNC4-204ENST00000438661 ANK3Q12955 4377 aaKnown RBP12□□□□□ -0.49
KCNC4-204ENST00000438661 TENM4Q6N022 2769 aa11.99□□□□□ -0.49
KCNC4-204ENST00000438661 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
KCNC4-204ENST00000438661 Q6ZRP5 223 aa11.99□□□□□ -0.49
KCNC4-204ENST00000438661 hDV103S1A0JD37 113 aa11.98□□□□□ -0.49
KCNC4-204ENST00000438661 X6R8D5 127 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms