RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
SPEN-202ENST00000438066 A0A096LPF7 62 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 TMEM238C9JI98 176 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 H3BUT2 72 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 NDUFA1O15239 70 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 CCL25O15444 150 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 RBX1P62877 108 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 COL7A1Q02388 2944 aa4.1□□□□□ -1.75
SPEN-202ENST00000438066 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 PSPHP1O15172 72 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 TIMM17BO60830 172 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 KPRPQ5T749 579 aaPredicted RBP4.09□□□□□ -1.75
SPEN-202ENST00000438066 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 ZNF625Q96I27 306 aaPredicted RBP4.09□□□□□ -1.75
SPEN-202ENST00000438066 NAA38Q9BRA0 125 aaKnown RBP4.09□□□□□ -1.75
SPEN-202ENST00000438066 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 ICOSQ9Y6W8 199 aa4.09□□□□□ -1.75
SPEN-202ENST00000438066 LINC00959A0A1B0GUT2 108 aa4.09□□□□□ -1.76
SPEN-202ENST00000438066 H3BNG1 76 aa4.09□□□□□ -1.76
SPEN-202ENST00000438066 NDUFS5O43920 106 aa4.09□□□□□ -1.76
SPEN-202ENST00000438066 HTN3P15516 51 aa4.09□□□□□ -1.76
SPEN-202ENST00000438066 IGLL5B9A064 214 aa4.08□□□□□ -1.76
SPEN-202ENST00000438066 MIAQ16674 131 aa4.08□□□□□ -1.76
SPEN-202ENST00000438066 LELP1Q5T871 98 aa4.08□□□□□ -1.76
SPEN-202ENST00000438066 IGKV3OR2-268A0A0C4DH90 116 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 TMEM262E9PQX1 116 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 K7EIL1 84 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 K7EP34 96 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 A0A0B4J2C4 111 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 PRB2P02812 416 aaPredicted RBP4.07□□□□□ -1.76
SPEN-202ENST00000438066 TLX1NBP0CAT3 122 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 FABP2P12104 132 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 MUSTN1Q8IVN3 82 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 CAMK2N2Q96S95 79 aa4.07□□□□□ -1.76
SPEN-202ENST00000438066 ZNF861PO60384 105 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 APOMO95445 188 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 IFITM1P13164 125 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 PSMB2P49721 201 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 SS18Q15532 418 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 CLPSL2Q6UWE3 100 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 LYPD5Q6UWN5 251 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 LINC00269Q8N2A0 174 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 SPCS1Q9Y6A9 102 aa4.06□□□□□ -1.76
SPEN-202ENST00000438066 ANGP03950 147 aaKnown RBP4.05□□□□□ -1.76
SPEN-202ENST00000438066 XCL1P47992 114 aa4.05□□□□□ -1.76
SPEN-202ENST00000438066 C5orf38Q86SI9 138 aa4.05□□□□□ -1.76
SPEN-202ENST00000438066 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
SPEN-202ENST00000438066 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.04□□□□□ -1.76
SPEN-202ENST00000438066 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 IGHV3-33P01772 117 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 CIRBPQ14011 172 aaKnown RBP4.04□□□□□ -1.76
SPEN-202ENST00000438066 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 DAND5Q8N907 189 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 DEFB131BA0A096LNP1 70 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 Q8IZM0 81 aa4.04□□□□□ -1.76
SPEN-202ENST00000438066 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
SPEN-202ENST00000438066 IGLV10-54A0A075B6I4 117 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 IGHV6-1A0A0B4J1U7 121 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 COX7A2LO14548 114 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 NPC2P61916 151 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 ENHOQ6UWT2 76 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 TOMM7Q9P0U1 55 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 CBY1Q9Y3M2 126 aa4.03□□□□□ -1.76
SPEN-202ENST00000438066 IBA57-AS1B1ANH7 110 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 ESRGQ1W209 222 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 COPS9Q8WXC6 57 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 KLK12Q9UKR0 248 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
SPEN-202ENST00000438066 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 A0A0U1RQV1 116 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 H3BMG7 143 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 LYRM7Q5U5X0 104 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 C15orf56Q8N910 161 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 DEFB121Q5J5C9 76 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 LINC01556Q5JQF7 62 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 KRTAP26-1Q6PEX3 210 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 C2orf82Q6UX34 121 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 MIR7-3HGQ8N6C7 128 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 C15orf53Q8NAA6 179 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
SPEN-202ENST00000438066 TRBV20-1A0A075B6N2 111 aa4□□□□□ -1.77
SPEN-202ENST00000438066 TRBV30A0A0K0K1B3 111 aa4□□□□□ -1.77
SPEN-202ENST00000438066 TCL1BO95988 128 aa4□□□□□ -1.77
SPEN-202ENST00000438066 CRPP02741 224 aa4□□□□□ -1.77
SPEN-202ENST00000438066 UBE2WQ96B02 151 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms