RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 UNQ6190/PRO20217Q6UXQ8 127 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 TMEM263Q8WUH6 116 aaKnown RBP1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 PLAC8Q9NZF1 115 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 COL6A3P12111 3177 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 ZNF831Q5JPB2 1677 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 SIPA1L3O60292 1781 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 MYO7BQ6PIF6 2116 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 UNC80Q8N2C7 3258 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 ATXN8Q156A1 80 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 C10orf99Q6UWK7 81 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 BRCA2P51587 3418 aa1.79□□□□□ -2.12
HMGB1P45-201ENST00000435986 MKI67P46013 3256 aaKnown RBP1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 BCORQ6W2J9 1755 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 NDUFB1O75438 58 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 C10orf113Q5VZT2 155 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 LINC00472Q9H8W2 130 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 EYSQ5T1H1 3165 aa1.78□□□□□ -2.12
HMGB1P45-201ENST00000435986 PDE4DIPQ5VU43 2346 aa1.78□□□□□ -2.13
HMGB1P45-201ENST00000435986 COL4A1P02462 1669 aa1.77□□□□□ -2.13
HMGB1P45-201ENST00000435986 CD163L1Q9NR16 1453 aa1.77□□□□□ -2.13
HMGB1P45-201ENST00000435986 SDK1Q7Z5N4 2213 aa1.77□□□□□ -2.13
HMGB1P45-201ENST00000435986 S100A3P33764 101 aa1.77□□□□□ -2.13
HMGB1P45-201ENST00000435986 SPINK7P58062 85 aa1.77□□□□□ -2.13
HMGB1P45-201ENST00000435986 HTTP42858 3142 aa1.76□□□□□ -2.13
HMGB1P45-201ENST00000435986 FXYD6-FXYD2A0A087WZ82 144 aa1.76□□□□□ -2.13
HMGB1P45-201ENST00000435986 SMIM11BQ8TCY0 68 aa1.76□□□□□ -2.13
HMGB1P45-201ENST00000435986 A0A0C4DFX4 3053 aa1.76□□□□□ -2.13
HMGB1P45-201ENST00000435986 PRUNE2Q8WUY3 3088 aa1.76□□□□□ -2.13
HMGB1P45-201ENST00000435986 REV3LO60673 3130 aa1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 ZNF236Q9UL36 1845 aa1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 NCR3O14931 201 aa1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 LINC00575Q6W349 94 aa1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 INTS1Q8N201 2190 aaKnown RBP1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 SPTBN5Q9NRC6 3674 aaKnown RBP1.75□□□□□ -2.13
HMGB1P45-201ENST00000435986 LAMA2P24043 3122 aaKnown RBP1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 DNAJC13O75165 2243 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 SORL1Q92673 2214 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 TRAV21A0A0B4J279 112 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 IFI6P09912 130 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 Q6ZRX8 168 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 FAM103A1Q9BTL3 118 aaKnown RBP1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 VCANP13611 3396 aa1.74□□□□□ -2.13
HMGB1P45-201ENST00000435986 RANBP2P49792 3224 aaKnown RBP1.73□□□□□ -2.13
HMGB1P45-201ENST00000435986 ANKRD36CQ5JPF3 1778 aa1.73□□□□□ -2.13
HMGB1P45-201ENST00000435986 A0A096LNT2 108 aa1.73□□□□□ -2.13
HMGB1P45-201ENST00000435986 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P45-201ENST00000435986 DDX60Q8IY21 1712 aaKnown RBP1.73□□□□□ -2.13
HMGB1P45-201ENST00000435986 ARL14EPLP0DKL9 152 aa1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 HMGA1P17096 107 aaKnown RBP1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 NREPQ16612 68 aa1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 DEFB112Q30KQ8 113 aa1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 WFDC9Q8NEX5 89 aa1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 DNAH12Q6ZR08 3092 aa1.72□□□□□ -2.13
HMGB1P45-201ENST00000435986 LRRC37A2A6NM11 1700 aa1.71□□□□□ -2.13
HMGB1P45-201ENST00000435986 MUC3AQ02505 3323 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 MED13LQ71F56 2210 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 LAMA3Q16787 3333 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 A0A0D9SFI3 127 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 A0A1B0GU69 56 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 PIN1P1O15428 100 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 HAMPP81172 84 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 GAFA1Q96PS6 74 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 LRRC37AA6NMS7 1700 aa1.71□□□□□ -2.14
HMGB1P45-201ENST00000435986 A0A1B0GUL6 1792 aa1.7□□□□□ -2.14
HMGB1P45-201ENST00000435986 ANKRD36A6QL64 1941 aa1.7□□□□□ -2.14
HMGB1P45-201ENST00000435986 G3V318 75 aa1.7□□□□□ -2.14
HMGB1P45-201ENST00000435986 ANGP03950 147 aaKnown RBP1.7□□□□□ -2.14
HMGB1P45-201ENST00000435986 CDH23Q9H251 3354 aa1.7□□□□□ -2.14
HMGB1P45-201ENST00000435986 DUOX1Q9NRD9 1551 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 MYO7AQ13402 2215 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 LY6G6CO95867 125 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 FXYD6Q9H0Q3 95 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 CEP290O15078 2479 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 XIRP2A4UGR9 3374 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 WDFY4Q6ZS81 3184 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 TRIOBPQ9H2D6 2365 aa1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 DDX60LQ5H9U9 1706 aaKnown RBP1.69□□□□□ -2.14
HMGB1P45-201ENST00000435986 LINC01549A6NIU2 74 aa1.68□□□□□ -2.14
HMGB1P45-201ENST00000435986 USP34Q70CQ2 3546 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 LCE6AA0A183 80 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 SNRPGP15A8MWD9 76 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 PLXNB2O15031 1838 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 TRANK1O15050 2925 aa1.67□□□□□ -2.14
HMGB1P45-201ENST00000435986 ABCA1O95477 2261 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 CHD9Q3L8U1 2897 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 BDP1A6H8Y1 2624 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 PRB1P04280 392 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 Q6ZSA8 131 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 SSC5DA1L4H1 1573 aa1.66□□□□□ -2.14
HMGB1P45-201ENST00000435986 ASCC3Q8N3C0 2202 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms