RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 A6NJY4 79 aa8.35□□□□□ -1.07
CDC42EP1-204ENST00000434728 SS18Q15532 418 aa8.35□□□□□ -1.07
CDC42EP1-204ENST00000434728 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
CDC42EP1-204ENST00000434728 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
CDC42EP1-204ENST00000434728 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
CDC42EP1-204ENST00000434728 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
CDC42EP1-204ENST00000434728 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
CDC42EP1-204ENST00000434728 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
CDC42EP1-204ENST00000434728 LINC00959A0A1B0GUT2 108 aa8.33□□□□□ -1.08
CDC42EP1-204ENST00000434728 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
CDC42EP1-204ENST00000434728 MALP21145 153 aa8.33□□□□□ -1.08
CDC42EP1-204ENST00000434728 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
CDC42EP1-204ENST00000434728 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
CDC42EP1-204ENST00000434728 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
CDC42EP1-204ENST00000434728 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
CDC42EP1-204ENST00000434728 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
CDC42EP1-204ENST00000434728 LINC00469Q8N7U9 141 aa8.32□□□□□ -1.08
CDC42EP1-204ENST00000434728 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 TMEM238C9JI98 176 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 TIMM17BO60830 172 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 FXYD2P54710 66 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 Q6ZVH6 145 aa8.31□□□□□ -1.08
CDC42EP1-204ENST00000434728 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
CDC42EP1-204ENST00000434728 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
CDC42EP1-204ENST00000434728 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
CDC42EP1-204ENST00000434728 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
CDC42EP1-204ENST00000434728 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
CDC42EP1-204ENST00000434728 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
CDC42EP1-204ENST00000434728 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 COX7A2LO14548 114 aa8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 NDUFA1O15239 70 aa8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 PPDPFQ9H3Y8 114 aa8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
CDC42EP1-204ENST00000434728 VAMP3Q15836 100 aa8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 SPANXDQ9BXN6 97 aa8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 NHP2Q9NX24 153 aaKnown RBP8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
CDC42EP1-204ENST00000434728 APOMO95445 188 aa8.26□□□□□ -1.09
CDC42EP1-204ENST00000434728 SFTA2Q6UW10 78 aa8.26□□□□□ -1.09
CDC42EP1-204ENST00000434728 GTF2H5Q6ZYL4 71 aa8.26□□□□□ -1.09
CDC42EP1-204ENST00000434728 SMIM1B2RUZ4 78 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 HERV-K104P63124 156 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 RPL24P83731 157 aaKnown RBP8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 COPS9Q8WXC6 57 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
CDC42EP1-204ENST00000434728 TRAV13-1A0A0B4J241 112 aa8.24□□□□□ -1.09
CDC42EP1-204ENST00000434728 A0A1W2PPM0 123 aa8.24□□□□□ -1.09
CDC42EP1-204ENST00000434728 FABP2P12104 132 aa8.24□□□□□ -1.09
CDC42EP1-204ENST00000434728 IFITM1P13164 125 aa8.24□□□□□ -1.09
CDC42EP1-204ENST00000434728 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
CDC42EP1-204ENST00000434728 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
CDC42EP1-204ENST00000434728 H3BUT2 72 aa8.23□□□□□ -1.09
CDC42EP1-204ENST00000434728 K7EP34 96 aa8.23□□□□□ -1.09
CDC42EP1-204ENST00000434728 LYRM7Q5U5X0 104 aa8.23□□□□□ -1.09
CDC42EP1-204ENST00000434728 LITAFQ99732 161 aa8.23□□□□□ -1.09
CDC42EP1-204ENST00000434728 A0A0B4J2C4 111 aa8.22□□□□□ -1.09
CDC42EP1-204ENST00000434728 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
CDC42EP1-204ENST00000434728 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
CDC42EP1-204ENST00000434728 DIRC1Q969H9 104 aa8.22□□□□□ -1.09
CDC42EP1-204ENST00000434728 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
CDC42EP1-204ENST00000434728 A0A087WZ39 114 aa8.21□□□□□ -1.1
CDC42EP1-204ENST00000434728 IGHV3OR16-9A0A0B4J2B5 98 aa8.21□□□□□ -1.1
CDC42EP1-204ENST00000434728 GAGE10A6NGK3 116 aa8.21□□□□□ -1.1
CDC42EP1-204ENST00000434728 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
CDC42EP1-204ENST00000434728 K7ERJ3 54 aa8.2□□□□□ -1.1
CDC42EP1-204ENST00000434728 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
CDC42EP1-204ENST00000434728 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
CDC42EP1-204ENST00000434728 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
CDC42EP1-204ENST00000434728 SPCS1Q9Y6A9 102 aa8.19□□□□□ -1.1
CDC42EP1-204ENST00000434728 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
CDC42EP1-204ENST00000434728 PRO1854Q9UHT4 67 aa8.18□□□□□ -1.1
CDC42EP1-204ENST00000434728 A4D1N5 150 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 CFC1P0CG37 223 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
CDC42EP1-204ENST00000434728 UBE2BP63146 152 aa8.16□□□□□ -1.1
CDC42EP1-204ENST00000434728 H0Y9J4 135 aa8.15□□□□□ -1.1
CDC42EP1-204ENST00000434728 TSPAN13O95857 204 aa8.15□□□□□ -1.1
CDC42EP1-204ENST00000434728 CXCL5P42830 114 aa8.15□□□□□ -1.1
CDC42EP1-204ENST00000434728 Q8IZM0 81 aa8.15□□□□□ -1.1
CDC42EP1-204ENST00000434728 F8WDY8 70 aa8.14□□□□□ -1.11
CDC42EP1-204ENST00000434728 PRR4Q16378 134 aa8.14□□□□□ -1.11
CDC42EP1-204ENST00000434728 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
CDC42EP1-204ENST00000434728 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
CDC42EP1-204ENST00000434728 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
CDC42EP1-204ENST00000434728 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
CDC42EP1-204ENST00000434728 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
CDC42EP1-204ENST00000434728 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
CDC42EP1-204ENST00000434728 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
CDC42EP1-204ENST00000434728 M0QXV9 152 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms