RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
GTF2A1-202ENST00000434192 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 TMEM238C9JI98 176 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 WFDC2Q14508 124 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 LINC00526Q96FQ7 95 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 DNAH11Q96DT5 4516 aa4.5□□□□□ -1.69
GTF2A1-202ENST00000434192 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 TIMM17BO60830 172 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 CIRBPQ14011 172 aaKnown RBP4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 Q6ZRU5 148 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 LINC00336Q6ZUF6 198 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 HIGD1BQ9P298 99 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 ERG28Q9UKR5 140 aa4.49□□□□□ -1.69
GTF2A1-202ENST00000434192 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 A0A087WTM6 91 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 DDTP30046 118 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 CNBPP62633 177 aaKnown RBP4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 COX17Q14061 63 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 Q8N814 137 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 SPANXB1Q9NS25 103 aaPredicted RBP4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
GTF2A1-202ENST00000434192 PKD1P98161 4303 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 RTL8CO15255 209 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 PFN2P35080 140 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 LINC00158P58513 81 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 HSD52Q0P140 79 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 SPANXDQ9BXN6 97 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
GTF2A1-202ENST00000434192 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 Q6ZVH6 145 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 MIR7-3HGQ8N6C7 128 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 COPS9Q8WXC6 57 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 HIST1H4GQ99525 98 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 LITAFQ99732 161 aa4.46□□□□□ -1.7
GTF2A1-202ENST00000434192 PKHD1P08F94 4074 aa4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 RPL18AQ02543 176 aaKnown RBP4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 TAL2Q16559 108 aa4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 DAND5Q8N907 189 aa4.45□□□□□ -1.7
GTF2A1-202ENST00000434192 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 M0R143 59 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 TLX1NBP0CAT3 122 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 IFITM1P13164 125 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 NPC2P61916 151 aa4.44□□□□□ -1.7
GTF2A1-202ENST00000434192 RPL24P83731 157 aaKnown RBP4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 ADAMTSL4-AS1Q5T5F5 129 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 CEND1Q8N111 149 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 C9orf163Q8N9P6 203 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 PPDPFQ9H3Y8 114 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 DNAH8Q96JB1 4490 aa4.43□□□□□ -1.7
GTF2A1-202ENST00000434192 HINT1P49773 126 aaPredicted RBP4.42□□□□□ -1.7
GTF2A1-202ENST00000434192 GAGE2EQ4V326 116 aa4.42□□□□□ -1.7
GTF2A1-202ENST00000434192 Q6ZRP5 223 aa4.42□□□□□ -1.7
GTF2A1-202ENST00000434192 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
GTF2A1-202ENST00000434192 GAGE2DQ9UEU5 116 aa4.42□□□□□ -1.7
GTF2A1-202ENST00000434192 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 A0A096LNI7 61 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 FXYD2P54710 66 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 BATFQ16520 125 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 BVES-AS1Q5T3Y7 98 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 SOSTDC1Q6X4U4 206 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 MUSTN1Q8IVN3 82 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 SNHG12Q9BXW3 62 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 XAGE1AQ9HD64 81 aa4.41□□□□□ -1.7
GTF2A1-202ENST00000434192 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
GTF2A1-202ENST00000434192 A4D1N5 150 aa4.4□□□□□ -1.71
GTF2A1-202ENST00000434192 NDUFC2O95298 119 aa4.4□□□□□ -1.71
GTF2A1-202ENST00000434192 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
GTF2A1-202ENST00000434192 LINC00474Q9P2X8 69 aa4.4□□□□□ -1.71
GTF2A1-202ENST00000434192 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 LOC107984156A0A0G2JMH3 177 aa4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 A6NDN8 102 aa4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 FUSP35637 526 aaKnown RBP eCLIP4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 ARL17AQ8IVW1 177 aa4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
GTF2A1-202ENST00000434192 HERC2O95714 4834 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 NCR3O14931 201 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms