RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 PLA2G2DQ9UNK4 145 aa15.6■□□□□ 0.09
CPNE1-212ENST00000430570 ANKRD39Q53RE8 183 aa15.59■□□□□ 0.09
CPNE1-212ENST00000430570 HNRNPA3P51991 378 aaKnown RBP15.58■□□□□ 0.08
CPNE1-212ENST00000430570 PRR3P79522 188 aaKnown RBP15.58■□□□□ 0.08
CPNE1-212ENST00000430570 MIR7-3HGQ8N6C7 128 aa15.57■□□□□ 0.08
CPNE1-212ENST00000430570 TTTY13Q9BZ97 58 aa15.57■□□□□ 0.08
CPNE1-212ENST00000430570 LINC00587B1AMM8 73 aa15.56■□□□□ 0.08
CPNE1-212ENST00000430570 SRRM2Q9UQ35 2752 aaKnown RBP15.55■□□□□ 0.08
CPNE1-212ENST00000430570 Q8NDZ9 215 aa15.55■□□□□ 0.08
CPNE1-212ENST00000430570 PSORS1C2Q9UIG4 136 aa15.55■□□□□ 0.08
CPNE1-212ENST00000430570 A0A0J9YXY3 114 aa15.54■□□□□ 0.08
CPNE1-212ENST00000430570 AKR1D1P51857 326 aa15.54■□□□□ 0.08
CPNE1-212ENST00000430570 IGLV5-37A0A075B6J1 123 aa15.53■□□□□ 0.08
CPNE1-212ENST00000430570 DAND5Q8N907 189 aa15.53■□□□□ 0.08
CPNE1-212ENST00000430570 TMA7Q9Y2S6 64 aaKnown RBP15.53■□□□□ 0.08
CPNE1-212ENST00000430570 VPREB1P12018 145 aa15.52■□□□□ 0.08
CPNE1-212ENST00000430570 UBE2BP63146 152 aa15.52■□□□□ 0.08
CPNE1-212ENST00000430570 MRPL55Q7Z7F7 128 aaKnown RBP15.52■□□□□ 0.08
CPNE1-212ENST00000430570 TP73-AS1Q9UF72 201 aa15.52■□□□□ 0.08
CPNE1-212ENST00000430570 PKHD1L1Q86WI1 4243 aa15.5■□□□□ 0.07
CPNE1-212ENST00000430570 ZNF815PA8K554 130 aa15.5■□□□□ 0.07
CPNE1-212ENST00000430570 LBHQ53QV2 105 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-212ENST00000430570 LINC00167Q96N53 147 aa15.5■□□□□ 0.07
CPNE1-212ENST00000430570 SCGB1D1O95968 90 aa15.49■□□□□ 0.07
CPNE1-212ENST00000430570 PCLOQ9Y6V0 5065 aa15.49■□□□□ 0.07
CPNE1-212ENST00000430570 GAGE10A6NGK3 116 aa15.48■□□□□ 0.07
CPNE1-212ENST00000430570 ADAMTSL4-AS1Q5T5F5 129 aa15.48■□□□□ 0.07
CPNE1-212ENST00000430570 NKAPP1Q8N9T2 125 aa15.48■□□□□ 0.07
CPNE1-212ENST00000430570 RPL24P83731 157 aaKnown RBP15.47■□□□□ 0.07
CPNE1-212ENST00000430570 C1orf137Q5JT78 98 aa15.47■□□□□ 0.07
CPNE1-212ENST00000430570 FLG2Q5D862 2391 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-212ENST00000430570 RPL37AP8A6NKH3 93 aa15.45■□□□□ 0.06
CPNE1-212ENST00000430570 PCP2Q8IVA1 136 aa15.45■□□□□ 0.06
CPNE1-212ENST00000430570 BOD1L2Q8IYS8 172 aa15.45■□□□□ 0.06
CPNE1-212ENST00000430570 LITAFQ99732 161 aa15.44■□□□□ 0.06
CPNE1-212ENST00000430570 LOC107984156A0A0G2JMH3 177 aa15.43■□□□□ 0.06
CPNE1-212ENST00000430570 ARL17AQ8IVW1 177 aa15.43■□□□□ 0.06
CPNE1-212ENST00000430570 EIF4EBP3O60516 100 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-212ENST00000430570 SRSF9Q13242 221 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPNE1-212ENST00000430570 SOSTDC1Q6X4U4 206 aa15.42■□□□□ 0.06
CPNE1-212ENST00000430570 HSBP1L1C9JCN9 74 aa15.41■□□□□ 0.06
CPNE1-212ENST00000430570 TIMM17BO60830 172 aa15.41■□□□□ 0.06
CPNE1-212ENST00000430570 NPC2P61916 151 aa15.41■□□□□ 0.06
CPNE1-212ENST00000430570 IGLV7-43P04211 117 aa15.39■□□□□ 0.05
CPNE1-212ENST00000430570 IGKV2-28A0A075B6P5 120 aa15.38■□□□□ 0.05
CPNE1-212ENST00000430570 IGKV2D-28P01615 120 aa15.38■□□□□ 0.05
CPNE1-212ENST00000430570 IGLV1-50A0A075B6I6 118 aa15.37■□□□□ 0.05
CPNE1-212ENST00000430570 M0R378 163 aa15.37■□□□□ 0.05
CPNE1-212ENST00000430570 NCR3O14931 201 aa15.37■□□□□ 0.05
CPNE1-212ENST00000430570 JOSD1Q15040 202 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-212ENST00000430570 SCGB1D4Q6XE38 83 aa15.36■□□□□ 0.05
CPNE1-212ENST00000430570 MIEN1Q9BRT3 115 aa15.36■□□□□ 0.05
CPNE1-212ENST00000430570 MYCBP2O75592 4640 aa15.35■□□□□ 0.05
CPNE1-212ENST00000430570 SPINK6Q6UWN8 80 aa15.35■□□□□ 0.05
CPNE1-212ENST00000430570 LINC00308Q8TCZ7 52 aa15.34■□□□□ 0.05
CPNE1-212ENST00000430570 LRP1Q07954 4544 aaKnown RBP15.34■□□□□ 0.05
CPNE1-212ENST00000430570 FAT3Q8TDW7 4589 aa15.33■□□□□ 0.04
CPNE1-212ENST00000430570 TMEM238C9JI98 176 aa15.31■□□□□ 0.04
CPNE1-212ENST00000430570 BCE1O60756 84 aa15.3■□□□□ 0.04
CPNE1-212ENST00000430570 SPANXDQ9BXN6 97 aa15.3■□□□□ 0.04
CPNE1-212ENST00000430570 SPANXCQ9NY87 97 aa15.3■□□□□ 0.04
CPNE1-212ENST00000430570 NDUFC2O95298 119 aa15.29■□□□□ 0.04
CPNE1-212ENST00000430570 PYY3Q5JQD4 70 aa15.27■□□□□ 0.04
CPNE1-212ENST00000430570 TMEM126AQ9H061 195 aa15.27■□□□□ 0.04
CPNE1-212ENST00000430570 TRBV10-3A0A0K0K1G6 114 aa15.26■□□□□ 0.03
CPNE1-212ENST00000430570 TRBV10-2A0A0K0K1G8 114 aa15.26■□□□□ 0.03
CPNE1-212ENST00000430570 KRTAP29-1A8MX34 341 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-212ENST00000430570 REG3GQ6UW15 175 aa15.26■□□□□ 0.03
CPNE1-212ENST00000430570 SPANXB1Q9NS25 103 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-212ENST00000430570 PAM16Q9Y3D7 125 aa15.26■□□□□ 0.03
CPNE1-212ENST00000430570 ZNF861PO60384 105 aa15.25■□□□□ 0.03
CPNE1-212ENST00000430570 COX8AP10176 69 aa15.24■□□□□ 0.03
CPNE1-212ENST00000430570 SPATA45Q537H7 98 aa15.24■□□□□ 0.03
CPNE1-212ENST00000430570 VAMP8Q9BV40 100 aa15.23■□□□□ 0.03
CPNE1-212ENST00000430570 OXTP01178 125 aa15.22■□□□□ 0.03
CPNE1-212ENST00000430570 DDTP30046 118 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 KRTAP13-1Q8IUC0 172 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 MUSTN1Q8IVN3 82 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 DIRC1Q969H9 104 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 C14orf144Q96I85 54 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 KCNQ1DNQ9H478 68 aa15.21■□□□□ 0.03
CPNE1-212ENST00000430570 H0Y9J4 135 aa15.2■□□□□ 0.02
CPNE1-212ENST00000430570 Q6ZVH6 145 aa15.2■□□□□ 0.02
CPNE1-212ENST00000430570 PRYO14603 147 aa15.19■□□□□ 0.02
CPNE1-212ENST00000430570 IFITM1P13164 125 aa15.19■□□□□ 0.02
CPNE1-212ENST00000430570 RPL28P46779 137 aaKnown RBP15.19■□□□□ 0.02
CPNE1-212ENST00000430570 FAM19A1Q7Z5A9 133 aa15.19■□□□□ 0.02
CPNE1-212ENST00000430570 IGLV6-57P01721 117 aa15.18■□□□□ 0.02
CPNE1-212ENST00000430570 UBE2AP49459 152 aa15.18■□□□□ 0.02
CPNE1-212ENST00000430570 PRLHP81277 87 aa15.18■□□□□ 0.02
CPNE1-212ENST00000430570 S100A7L2Q5SY68 101 aa15.17■□□□□ 0.02
CPNE1-212ENST00000430570 DLEU1O43261 78 aa15.17■□□□□ 0.02
CPNE1-212ENST00000430570 SPRR1AP35321 89 aa15.17■□□□□ 0.02
CPNE1-212ENST00000430570 J3QL48 77 aa15.16■□□□□ 0.02
CPNE1-212ENST00000430570 PPDPFQ9H3Y8 114 aa15.16■□□□□ 0.02
CPNE1-212ENST00000430570 COPS9Q8WXC6 57 aa15.15■□□□□ 0.02
CPNE1-212ENST00000430570 KRTAP4-16G5E9R7 235 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-212ENST00000430570 LINC01600Q96MT4 127 aa15.14■□□□□ 0.01
CPNE1-212ENST00000430570 LINC00337Q8N6G1 96 aa15.13■□□□□ 0.01
CPNE1-212ENST00000430570 MT1HL1P0DM35 61 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms